Factsheet for Os12t0178700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G124800.1	Wheat	cytosol	88.73	64.17
TraesCS5B01G120600.1	Wheat	cytosol	87.84	63.52
TraesCS5A01G114600.1	Wheat	cytosol	86.4	63.14
EES16755	Sorghum	cytosol	83.01	61.29
Zm00001d023583_P005	Maize	plastid	82.11	60.55
Os01t0681100-01	Rice	cytosol, plasma membrane	8.41	25.54
Os03t0713100-01	Rice	plasma membrane	18.78	17.18
Os10t0567800-01	Rice	plasma membrane	18.43	16.67
Os05t0556100-01	Rice	plasma membrane	17.89	16.42
Os09t0572900-01	Rice	cytosol, plasma membrane	17.53	15.65
Os04t0129900-01	Rice	cytosol	16.64	13.6
Os01t0920400-01	Rice	nucleus, plastid	19.5	13.33
Os03t0260000-01	Rice	cytosol	15.56	12.83
Os01t0748000-00	Rice	plastid	18.6	12.65
Os04t0381000-01	Rice	cytosol	18.25	12.56
Os08t0425100-01	Rice	plasma membrane	12.88	9.4
Os06t0247800-01	Rice	plasma membrane	13.42	8.23
Os02t0738900-01	Rice	plasma membrane	13.24	8.02

Protein Annotations

MapMan:13.6.1.3	Gene3D:3.40.50.300	UniProt:A0A0N7KTN7	ProteinID:BAT16130.1	ncoils:Coil	InterPro:Dynamin_GTPase
InterPro:Dynamin_SF	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0007623	GO:GO:0008017	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009707	GO:GO:0009987	GO:GO:0010020	GO:GO:0016020	GO:GO:0016043	GO:GO:0016559
GO:GO:0016787	GO:GO:0042802	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	EnsemblPlantsGene:Os12g0178700	EnsemblPlants:Os12t0178700-01
InterPro:P-loop_NTPase	PFAM:PF00350	PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF78
SMART:SM00053	SUPFAM:SSF52540	UniParc:UPI0003939A00	SEG:seg	:	:

Description

ACCUMULATION AND REPLICATION OF CHLOROPLASTS5Similar to ARC5 (ACCUMULATION AND REPLICATION OF CHLOROPLAST 5); GTP binding / GTPase. (Os12t0178700-01)

Coordinates

chr12:-:3986839..3994495

Molecular Weight (calculated)

61862.7 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.174

Length

559 amino acids

Sequence
(BLAST)

001: MATPPESLSP AAAAVEDDWE EARGLLYEAY NELQGLAAEL GGAAAPAPAV VVVGHQTDGK SALVEALMGF QFNHVGGGTK TRRPVALHLR FNPRCHAPRC
101: RLLAGSGAGD DEDEEAGVAG RAMPLADIQA YIEAENMRLE NDPSQFSEKE IIIRIEYKHC PNLTIIDTPG LILPAPGRKN RVLQSQACAV ETLVRAKIKH
201: KETIILCLED CSDWSNATTR RVVMQVDPDL ARTVLVSTKL DTKILQFARA SDVEVFLHPP TCALDGSLLG DYPFFTSVPS GRVGSCHEAV FRSNEEFKKA
301: ISLRELEDVA SLEDKLGRGL TKEEKNRIGV SNLRLFLEEL LRKRYIESVP LIIPLLEKEH RGATRKLREV NQEISDLDEA KMKEKARLFH DSFLSKLSLL
401: LKGMVVAPPD RFGETLINER INGGTFTGSE NFLIPNKLMP NAGMRLYGGA QYHRAMAEFR LVVGSIRCPP ITREEIVNAC GVEDIHDGTN YSRTACVLAV
501: AKARDTFEPY LHQLGFRLLY IMKRLIPISA FLLEKDGENC SSHDVLVKRV KAVNLIEFA

Best Arabidopsis Sequence Match ( AT3G19720.1 )
(BLAST)

001: MAEVSAKSVT VEEMAEEDDA AIEERWSLYE AYNELHALAQ ELETPFEAPA VLVVGQQTDG KSALVEALMG FQFNHVGGGT KTRRPITLHM KYDPQCQFPL
101: CHLGSDDDPS VSLPKSLSQI QAYIEAENMR LEQEPCSPFS AKEIIVKVQY KYCPNLTIID TPGLIAPAPG LKNRALQVQA RAVEALVRAK MQHKEFIILC
201: LEDSSDWSIA TTRRIVMQVD PELSRTIVVS TKLDTKIPQF SCSSDVEVFL SPPASALDSS LLGDSPFFTS VPSGRVGYGQ DSVYKSNDEF KQAVSLREME
301: DIASLEKKLG RLLTKQEKSR IGISKLRLFL EELLWKRYKE SVPLIIPLLG KEYRSTVRKL DTVSKELSSL DEAKLKERGR TFHDLFLTKL SLLLKGTVVA
401: PPDKFGETLQ DERTQGGAFV GTDGLQFSHK LIPNAGMRLY GGAQYHRAMA EFRFLVGAIK CPPITREEIV NACGVEDIHD GTNYSRTACV IAVAKARETF
501: EPFLHQLGAR LLHILKRLLP ISVYLLQKEG EYLSGHEVFL KRVASAFNSF VESTEKSCRD KCMEDLASTT RYVTWSLHNK NRAGLRQFLD SFGGTEHNTT
601: SGNAIGFSLP QDALGGTTDT KSRSDVKLSH LASNIDSGSS IQTTEMRLAD LLDSTLWNRK LAPSSERIVY ALVQQIFQGI REYFLASAEL KFNCFLLMPI
701: VDKLPALLRE ELENAFEDDL DSIFDITNLR QSLDQKKRST EIELRRIKRI KEKFRVMNEK LNSHEFAQNL KAPSVQH

Arabidopsis Description

ARC5Dynamin-like protein ARC5 [Source:UniProtKB/Swiss-Prot;Acc:Q84N64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.