Factsheet for Zm00001d023583_P005

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16755	Sorghum	cytosol	95.65	95.77
TraesCS5D01G124800.1	Wheat	cytosol	84.3	82.66
Os12t0178700-01	Rice	cytosol	60.55	82.11
TraesCS5A01G114600.1	Wheat	cytosol	82.85	82.09
TraesCS5B01G120600.1	Wheat	cytosol	83.51	81.89
Zm00001d013426_P002	Maize	plasma membrane	16.75	20.79
Zm00001d033751_P003	Maize	plasma membrane	16.75	20.79
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	15.04	18.15
Zm00001d028495_P001	Maize	cytosol	15.83	17.8
Zm00001d009504_P002	Maize	cytosol	15.3	17.68
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	15.44	17.46
Zm00001d028497_P001	Maize	cytosol	13.59	16.51
Zm00001d042338_P002	Maize	extracellular, mitochondrion	17.55	16.28
Zm00001d012027_P002	Maize	cytosol	17.81	15.88
Zm00001d043451_P001	Maize	plastid	15.83	14.58
Zm00001d030005_P002	Maize	cytosol, mitochondrion	7.52	14.18
Zm00001d012752_P006	Maize	plastid	14.12	12.75
Zm00001d004012_P001	Maize	cytosol	16.23	11.24
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	13.32	11.06
Zm00001d037279_P005	Maize	plasma membrane	13.32	11.06
Zm00001d017979_P002	Maize	extracellular, mitochondrion	13.06	10.75
Zm00001d032256_P001	Maize	cytosol	12.93	10.54
Zm00001d051815_P002	Maize	cytosol	4.35	6.01

Protein Annotations

EntrezGene:100383294	MapMan:13.6.1.3	Gene3D:3.40.50.300	ProteinID:AQK39610.1	EMBL:BT066817	UniProt:C0PEU8
ncoils:Coil	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0007623	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009707	GO:GO:0009987	GO:GO:0010020	GO:GO:0016020	GO:GO:0016043
GO:GO:0016559	GO:GO:0016787	GO:GO:0042802	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	InterPro:P-loop_NTPase
PFAM:PF00350	PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF78	SMART:SM00053
SUPFAM:SSF52540	UniParc:UPI000195C9DB	EnsemblPlantsGene:Zm00001d023583	EnsemblPlants:Zm00001d023583_P005	EnsemblPlants:Zm00001d023583_T005	SEG:seg

Description

Dynamin-like protein ARC5

Coordinates

chr10:-:10822474..10840230

Molecular Weight (calculated)

85490.7 Da

IEP (calculated)

6.740

GRAVY (calculated)

-0.337

Length

758 amino acids

Sequence
(BLAST)

001: MATPFPLEAD EGEARELLYE AYNELHALAS ELGGAAAAPA VVVVGHQTDG KSALVEALMG FQFNHVGGGT KTRRPVALHL RFNPRCDEPQ CRLLSATGDA
101: EEHDEAGVAA RPMPLADIQA YIEAENLRLE NDPCQFSEKE IIIKVEYKHS PNLTIIDTPG LILPAPGRKN RVLQSQASAV ESLVRAKIQH KETIILCLED
201: CSDWSNATTR RVVMQVDPDL ARTVLVSTKL DTKIPQFARP SDVEVFLHPP NCVLDVSLLG DSPFFTSVPS GRVGSCHEAV FRSNGEFKKA ILSRELEDIA
301: SIEDKLGRSL TTMEKDRIGV GNLRLYLEEL LQKRYIKSVP LIIPLLEKQH RNTTSKLREI SHELSDLDET KLKEKAQLFH DTFLTKLSLL LKGMVVAPPD
401: KFGETLVNER INGGTFTGSE NFQLPNKMMP NGGMRLYGGA QYHRAMAEFR LVVGSTRCPP ITRDEIVNAC GVEDIHDGTN YSRTACVIAV AKARDTFEPF
501: LDQLGFRLLY ILKRLIPISV YLLEKDGEHF SSHEVLIRRV QEAFKRFVES TEQSCRQRCM EDLESTTRYV TWSLHNKNRA GLRHFLDSFV APEQLSVNTL
601: NERFSGLNDN KQDKAKGDSK SNHSPDTNSS TAMPETRLVD LLDSTLWNRR LVPSSERLVY ALVHQIFHGI KEHFLVTTEL KFNCFLLMPI VDKLPALLRQ
701: DLESAFEEEL DSIFDVTQLR QSLGQKKREL EIELKRIKRL KEKFGEINKK LNSLQVRQ

Best Arabidopsis Sequence Match ( AT3G19720.1 )
(BLAST)

001: MAEVSAKSVT VEEMAEEDDA AIEERWSLYE AYNELHALAQ ELETPFEAPA VLVVGQQTDG KSALVEALMG FQFNHVGGGT KTRRPITLHM KYDPQCQFPL
101: CHLGSDDDPS VSLPKSLSQI QAYIEAENMR LEQEPCSPFS AKEIIVKVQY KYCPNLTIID TPGLIAPAPG LKNRALQVQA RAVEALVRAK MQHKEFIILC
201: LEDSSDWSIA TTRRIVMQVD PELSRTIVVS TKLDTKIPQF SCSSDVEVFL SPPASALDSS LLGDSPFFTS VPSGRVGYGQ DSVYKSNDEF KQAVSLREME
301: DIASLEKKLG RLLTKQEKSR IGISKLRLFL EELLWKRYKE SVPLIIPLLG KEYRSTVRKL DTVSKELSSL DEAKLKERGR TFHDLFLTKL SLLLKGTVVA
401: PPDKFGETLQ DERTQGGAFV GTDGLQFSHK LIPNAGMRLY GGAQYHRAMA EFRFLVGAIK CPPITREEIV NACGVEDIHD GTNYSRTACV IAVAKARETF
501: EPFLHQLGAR LLHILKRLLP ISVYLLQKEG EYLSGHEVFL KRVASAFNSF VESTEKSCRD KCMEDLASTT RYVTWSLHNK NRAGLRQFLD SFGGTEHNTT
601: SGNAIGFSLP QDALGGTTDT KSRSDVKLSH LASNIDSGSS IQTTEMRLAD LLDSTLWNRK LAPSSERIVY ALVQQIFQGI REYFLASAEL KFNCFLLMPI
701: VDKLPALLRE ELENAFEDDL DSIFDITNLR QSLDQKKRST EIELRRIKRI KEKFRVMNEK LNSHEFAQNL KAPSVQH

Arabidopsis Description

ARC5Dynamin-like protein ARC5 [Source:UniProtKB/Swiss-Prot;Acc:Q84N64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.