Factsheet for Zm00001d028497_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39737	Sorghum	cytosol	87.66	83.64
TraesCS4D01G217900.1	Wheat	cytosol	76.92	72.4
Os03t0260000-01	Rice	cytosol	78.21	71.98
TraesCS4B01G217700.1	Wheat	cytosol	72.6	71.0
HORVU4Hr1G061820.3	Barley	plastid	76.92	70.59
Zm00001d028495_P001	Maize	cytosol	75.64	70.03
TraesCS4A01G086700.1	Wheat	cytosol	72.92	68.52
PGSC0003DMT400088564	Potato	cytosol	11.7	59.35
CDY36456	Canola	cytosol	17.47	58.6
KRH11082	Soybean	cytosol	12.5	53.42
PGSC0003DMT400095128	Potato	cytosol	37.02	52.62
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	46.47	52.06
AT1G60530.1	Thale cress	cytosol	24.68	51.16
PGSC0003DMT400064541	Potato	cytosol	50.16	51.14
CDY34117	Canola	cytosol	43.11	50.95
CDY03289	Canola	cytosol	43.11	50.95
Solyc04g072030.1.1	Tomato	cytosol	52.88	48.89
PGSC0003DMT400064542	Potato	cytosol	52.56	48.59
KRH21190	Soybean	cytosol	51.44	48.27
CDY47216	Canola	cytosol	41.35	47.96
CDY53048	Canola	cytosol	38.14	47.6
CDY47217	Canola	cytosol	39.1	47.47
KRH21193	Soybean	cytosol	37.66	47.38
KRH42928	Soybean	cytosol	44.87	46.74
KRH59040	Soybean	cytosol	50.48	46.67
CDY53046	Canola	cytosol	50.0	46.29
CDY34120	Canola	cytosol	48.4	46.18
CDY24536	Canola	cytosol	48.4	46.18
Bra031502.1-P	Field mustard	cytosol	48.24	46.02
PGSC0003DMT400064491	Potato	cytosol	29.17	45.96
PGSC0003DMT400050652	Potato	cytosol	45.19	45.85
PGSC0003DMT400072601	Potato	cytosol	45.35	45.72
Bra031505.1-P	Field mustard	cytosol	41.83	45.63
Bra027151.1-P	Field mustard	cytosol	49.2	45.48
AT1G60500.1	Thale cress	mitochondrion	48.72	45.44
CDY02039	Canola	cytosol, plastid	38.62	43.11
CDY53047	Canola	cytosol	6.25	40.21
Solyc11g069980.1.1	Tomato	cytosol	50.32	39.3
Bra010250.1-P	Field mustard	cytosol	24.2	38.23
CDY23281	Canola	cytosol	23.24	36.62
PGSC0003DMT400065607	Potato	cytosol	10.1	30.73
PGSC0003DMT400094747	Potato	cytosol	20.19	30.51
Bra031511.1-P	Field mustard	cytosol	24.36	24.6
CDY24530	Canola	cytosol, nucleus, plasma membrane	24.84	24.45
Zm00001d033751_P003	Maize	plasma membrane	20.99	21.44
Zm00001d013426_P002	Maize	plasma membrane	20.83	21.28
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	20.19	20.06
Zm00001d009504_P002	Maize	cytosol	19.71	18.75
Zm00001d038955_P001	Maize	cytosol, mitochondrion, plasma membrane	19.87	18.51
Zm00001d042338_P002	Maize	extracellular, mitochondrion	23.08	17.63
Zm00001d012027_P002	Maize	cytosol	22.92	16.82
Zm00001d030005_P002	Maize	cytosol, mitochondrion	10.26	15.92
Zm00001d023583_P005	Maize	plastid	16.51	13.59
Zm00001d043451_P001	Maize	plastid	15.22	11.54
Zm00001d004012_P001	Maize	cytosol	19.55	11.15
Zm00001d012752_P006	Maize	plastid	14.58	10.85
Zm00001d017979_P002	Maize	extracellular, mitochondrion	14.42	9.77
Zm00001d037279_P005	Maize	plasma membrane	14.1	9.64
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	13.94	9.53
Zm00001d032256_P001	Maize	cytosol	12.5	8.39
Zm00001d051815_P002	Maize	cytosol	4.17	4.74

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6JWT6	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381
ProteinID:ONL96201.1	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053	SUPFAM:SSF52540
UniParc:UPI0008424BA1	EnsemblPlantsGene:Zm00001d028497	EnsemblPlants:Zm00001d028497_P001	EnsemblPlants:Zm00001d028497_T001	SEG:seg	:

Description

Putative dynamin-related protein 4A

Coordinates

chr1:+:37198422..37200445

Molecular Weight (calculated)

69431.1 Da

IEP (calculated)

6.456

GRAVY (calculated)

-0.205

Length

624 amino acids

Sequence
(BLAST)

001: MSKKRRTGDK LENDVEDTKR TALAIASGVT ASAIAASYND QIRPVLDAVD RLRHLKGDPS TDSPKLQLEY SNGRVVTTTE AKVADAINAA TAEIAGSGKG
101: ISDAPITLVV RKSGVPDLTL VDLPGITRVP VQGQPEDIYD QIANIIKEYI TPKETIILNV LSATVDFPTC ESIRMSQQVD RTGERTLAVV TKVDKAPEGL
201: LEKVTMDDVH IGLGYVCVRN RVGDETYDQA RVAEAQLFKN HPLLSQIDKS MVGIPVLAQR LMQIQATIIA KCLPDIVKQI NDRLIRSSTE LDRMPPDVIN
301: TGDAVRAFLH IVKKVCTSLE NILVRGDFGC YPDEYYFHGT ARVAEMLSRY AKKLPAECPR CSDEKFLAEE MRVLEETMSI KLPNFLPRSA FHVLLKKKVE
401: MVSDVPQDLV SEVWEYVEDL VMKVLLQHSE NFPQVQSSCR RAIQSLMEKT RARSAQHVKE MIEMELVAGY TASPDYMKTW EAIMVGQKKF MGSVENKSEP
501: SKVTLECFGE VNVGHLRTHP DLAAQAFDLR ARLTAYWKII VLRLVDGLAL HVLRGVKRLV ENDLEDELAN ELLGNNMAGV ERMLSPPPSN GTKRDRLKKS
601: IILLQQSKEV VANIMDRISA ADEA

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.