Factsheet for GSMUA_Achr8P19650_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400088564	Potato	cytosol	12.75	57.72
AT1G60530.1	Thale cress	cytosol	27.65	51.16
Os03t0260000-01	Rice	cytosol	61.58	50.59
Zm00001d028495_P001	Maize	cytosol	60.86	50.3
TraesCS4D01G217900.1	Wheat	cytosol	59.78	50.23
TraesCS4B01G217700.1	Wheat	cytosol	57.45	50.16
PGSC0003DMT400065607	Potato	cytosol	18.31	49.76
EER95148	Sorghum	cytosol	59.96	49.34
HORVU4Hr1G061820.3	Barley	plastid	60.14	49.26
TraesCS4A01G213700.1	Wheat	cytosol	52.06	48.99
KXG39737	Sorghum	cytosol	56.73	48.32
TraesCS4A01G086700.1	Wheat	cytosol	57.27	48.04
PGSC0003DMT400050652	Potato	cytosol	52.96	47.97
Os04t0129900-01	Rice	cytosol	58.53	47.66
CDY47217	Canola	cytosol	43.63	47.28
TraesCS4D01G098800.1	Wheat	cytosol	57.99	47.22
PGSC0003DMT400064542	Potato	cytosol	57.09	47.11
Solyc04g072030.1.1	Tomato	cytosol	56.91	46.96
CDY47216	Canola	cytosol	45.24	46.84
Zm00001d028497_P001	Maize	cytosol	52.06	46.47
KRH21190	Soybean	cytosol	55.12	46.17
CDY53048	Canola	cytosol	41.11	45.8
KRH21193	Soybean	cytosol	40.57	45.56
KRH42928	Soybean	cytosol	48.83	45.41
Bra010250.1-P	Field mustard	cytosol	32.14	45.32
PGSC0003DMT400064491	Potato	cytosol	32.14	45.2
KRH59040	Soybean	cytosol	54.58	45.04
Bra031505.1-P	Field mustard	cytosol	46.14	44.93
Bra031502.1-P	Field mustard	cytosol	52.6	44.8
CDY34120	Canola	cytosol	52.6	44.8
CDY24536	Canola	cytosol	52.42	44.65
CDY53046	Canola	cytosol	53.86	44.51
AT1G60500.1	Thale cress	mitochondrion	53.32	44.39
CDY23281	Canola	cytosol	31.42	44.19
Bra027151.1-P	Field mustard	cytosol	52.96	43.7
PGSC0003DMT400064541	Potato	cytosol	47.58	43.3
CDY02039	Canola	cytosol, plastid	43.45	43.29
PGSC0003DMT400072601	Potato	cytosol	47.04	42.33
PGSC0003DMT400095128	Potato	cytosol	32.85	41.69
CDY03289	Canola	cytosol	39.14	41.29
CDY34117	Canola	cytosol	39.14	41.29
Solyc11g069980.1.1	Tomato	cytosol	56.55	39.42
CDY53047	Canola	cytosol	6.46	37.11
CDY36456	Canola	cytosol	11.13	33.33
KRH11082	Soybean	cytosol	8.26	31.51
PGSC0003DMT400094747	Potato	cytosol	22.98	30.99
Bra031511.1-P	Field mustard	cytosol	26.93	24.27
CDY24530	Canola	cytosol, nucleus, plasma membrane	27.11	23.82
GSMUA_Achr2P21630_001	Banana	cytosol	24.96	22.82
GSMUA_Achr7P11190_001	Banana	cytosol	24.96	22.71
GSMUA_Achr6P26600_001	Banana	cytosol	23.88	21.84
GSMUA_Achr8P27540_001	Banana	cytosol	23.52	21.51
GSMUA_Achr1P04880_001	Banana	cytosol	23.52	21.48
GSMUA_Achr11P...	Banana	cytosol	23.34	21.17
GSMUA_Achr2P18210_001	Banana	cytosol	22.98	20.95
GSMUA_AchrUn_...	Banana	cytosol	23.52	20.83
GSMUA_Achr10P...	Banana	cytosol	26.21	18.65
GSMUA_Achr8P08760_001	Banana	cytosol	20.65	14.94
GSMUA_Achr10P...	Banana	cytosol	14.36	11.78
GSMUA_Achr2P09480_001	Banana	plastid	17.06	11.61
GSMUA_Achr7P05530_001	Banana	nucleus	17.06	10.31
GSMUA_Achr3P01090_001	Banana	nucleus	16.88	10.24
GSMUA_Achr4P20040_001	Banana	cytosol	16.88	10.23
GSMUA_Achr1P18350_001	Banana	cytosol	16.34	10.18

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr8G19650_001	EnsemblPlants:GSMUA_Achr8P19650_001	EnsemblPlants:GSMUA_Achr8T19650_001	InterPro:G_DYNAMIN_dom	InterPro:IPR030381
UniProt:M0TRW8	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	PRINTS:PR00195	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF135	SMART:SM00053	SUPFAM:SSF52540	UniParc:UPI0002967361	SEG:seg

Description

Putative Interferon-induced GTP-binding protein Mx [Source:GMGC_GENE;Acc:GSMUA_Achr8G19650_001]

Coordinates

chr8:-:24862850..24864768

Molecular Weight (calculated)

62568.3 Da

IEP (calculated)

6.258

GRAVY (calculated)

-0.120

Length

557 amino acids

Sequence
(BLAST)

001: MAALASSYNQ RIRPLLDAVD RLRHLNVMQE GIELPTIVDV GDQSSGKSSV LESIAGISLP RGQGICTRVP LIMRLQNDPS AQEPHLQLEY QGKVVTTSES
101: AVPDAINAAT NEIAGTSKGI SDVPITLIVK RKGVPDLTMV DLPGITRVPV HGQPENIYEQ ISQIIMKYIT PKESIILNVL SATTYEEARD EEMKLFKEHP
201: LLSCIDKSIV GVQMLAQKLT QIQTASIAKC LPDIAKKIND KLNRNIAELE QMPQHLSTIA DAVRAFMRIL GASKESLRKL LIRGDFEEFS DDVDMHATAR
301: VADMHIHYAN QLPSQCPTTD DKFLMEEIDV LEEVMGIGLP NFLPPTAFHT ILKRKIKMVA DAPHQFVLEV WGYVEDVVVR VLLLRSQNFP QLQSSIRVAA
401: QDVVNKMRRK SLAFVQEIIE MEMTANYTWN TEYIKTWTEL MDGQRDFKVV IDDHSRSTML ELSGFGTVDV CHLRPYGGMA VQAFDLRTRL MAYWKSVLLR
501: LVEIMNNLVG EGMTGLQRMM EETATIAAKR ERLRKSITLL KESKDVLAQI NDRIYSG

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.