CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53047	Canola	cytosol	11.81	68.04
CDY36456	Canola	cytosol	22.36	67.2
CDY23281	Canola	cytosol	45.62	64.39
CDY47217	Canola	cytosol	58.14	63.23
CDY34120	Canola	cytosol	72.09	61.62
CDY24536	Canola	cytosol	71.74	61.31
CDY53046	Canola	cytosol	71.38	59.2
CDY53048	Canola	cytosol	52.77	59.0
CDY47216	Canola	cytosol	56.53	58.74
CDY34117	Canola	cytosol	52.59	55.68
CDY03289	Canola	cytosol	52.59	55.68
PGSC0003DMT400088564	Potato	cytosol	11.81	53.66
KRH11082	Soybean	cytosol	13.77	52.74
PGSC0003DMT400050652	Potato	cytosol	52.41	47.64
Solyc04g072030.1.1	Tomato	cytosol	55.64	46.07
PGSC0003DMT400064542	Potato	cytosol	55.46	45.93
TraesCS4B01G217700.1	Wheat	cytosol	50.09	43.89
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	43.29	43.45
TraesCS4D01G217900.1	Wheat	cytosol	51.16	43.14
Zm00001d028495_P001	Maize	cytosol	51.88	43.03
TraesCS4A01G086700.1	Wheat	cytosol	50.98	42.92
PGSC0003DMT400095128	Potato	cytosol	33.45	42.6
EER95148	Sorghum	cytosol	51.34	42.39
PGSC0003DMT400064541	Potato	cytosol	46.33	42.32
HORVU4Hr1G061820.3	Barley	plastid	51.34	42.21
Os03t0260000-01	Rice	cytosol	51.16	42.18
TraesCS4A01G213700.1	Wheat	cytosol	44.54	42.06
PGSC0003DMT400072601	Potato	cytosol	46.33	41.84
TraesCS4D01G098800.1	Wheat	cytosol	50.63	41.37
KXG39737	Sorghum	cytosol	48.3	41.28
Os04t0129900-01	Rice	cytosol	48.84	39.91
Zm00001d028497_P001	Maize	cytosol	43.11	38.62
Solyc11g069980.1.1	Tomato	cytosol	55.1	38.55
PGSC0003DMT400064491	Potato	cytosol	23.79	33.59
CDY35022	Canola	cytosol	11.99	23.34
CDY24530	Canola	cytosol, nucleus, plasma membrane	26.3	23.19
CDX67862	Canola	cytosol	24.33	22.3
CDY25074	Canola	cytosol	24.33	22.3
CDX89053	Canola	cytosol	24.69	22.04
CDY42672	Canola	cytosol	24.51	21.92
CDY41188	Canola	cytosol	23.97	21.44
CDX71832	Canola	cytosol	23.97	21.44
CDY33737	Canola	cytosol	23.43	21.34
CDX84001	Canola	cytosol	23.43	21.34
CDX81675	Canola	cytosol	23.43	21.34
CDY52026	Canola	cytosol	23.43	21.34
CDY27661	Canola	cytosol	23.26	21.31
CDX99702	Canola	cytosol	23.08	21.15
CDX67529	Canola	cytosol	23.08	21.15
CDY13364	Canola	cytosol	22.9	20.98
CDY23444	Canola	cytosol	22.54	20.39
CDY30477	Canola	cytosol	22.36	20.23
CDY35023	Canola	cytosol	12.34	19.88
CDY46101	Canola	cytosol	25.04	17.43
CDY28314	Canola	cytosol	25.04	17.37
CDY48440	Canola	cytosol	25.04	17.35
CDX68994	Canola	cytosol	25.22	17.34
CDX72418	Canola	cytosol	25.04	16.85
CDX75370	Canola	cytosol	25.04	16.67
CDX94910	Canola	cytosol	12.34	14.53
CDY29721	Canola	cytosol	3.58	12.9
CDY33414	Canola	cytosol	16.64	11.97
CDY20643	Canola	cytosol	13.42	11.85
CDY42203	Canola	cytosol	16.64	11.83
CDY31035	Canola	cytosol	12.88	11.5
CDY25877	Canola	plastid	15.21	10.33
CDX93442	Canola	cytosol	16.28	9.99
CDY45889	Canola	cytosol	15.92	9.67
CDY04455	Canola	cytosol	15.74	9.59
CDY34897	Canola	cytosol	15.38	9.4
CDY44550	Canola	cytosol	15.92	9.23
CDY50514	Canola	plastid	11.81	8.62
CDY27283	Canola	cytosol	11.45	8.39
CDX94909	Canola	mitochondrion	8.94	6.88
CDY29720	Canola	cytosol, extracellular	3.22	4.21

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078EMY7	EnsemblPlants:CDY02039	ProteinID:CDY02039	ProteinID:CDY02039.1
InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00113383001	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF135	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI0004EF29B5	:

Description

BnaC04g14620D

Coordinates

chrLK031931:+:758842..760901

Molecular Weight (calculated)

62460.7 Da

IEP (calculated)

6.214

GRAVY (calculated)

-0.128

Length

559 amino acids

Sequence
(BLAST)

001: MSSLAIVNTN LHNNAPTEAP IVSSHNHWIR PLLDTVDRLR NLNVMKEGIQ LPTIVVVSYQ SSGKSSVLES LAGISLPHGQ GICTRVPLVM KLMRNASPEI
101: EIWLKYSDKV VPTDEDHITE AICTATDAIA GSGKGVSDTP LELYVRRESV PDLTMVDLPG ITRNPINGQP EDIYEQVSAI IIKYIEPQES IILNVLSATC
201: DFSIYESIRM SKKVDKNGER TLAAVTKADL QPEGIVEKVT ADDVSIGLGY VCVRNRVGDE TYEEARKQEE LLFKTHPLLS KIDENIVGIP VLAQRLVEIQ
301: AKMIARCLPE LAQKINEKLD NSIHELNKLP TVITSSSEAL MTFMNIICSV KESLHRLLIV GDVSDMHSST RLADMLSKFS YDLQAEPQAA TEFLMDEIKI
401: VEMEKLTDYT CNQEYTTGYS RKMTEQGSFI SAVVSLSKAS FSLSRFGTVP ITHLRKYHAE LLHQAFDMKI RIKVYWPIVV RRIVDNTALY LQFTLKKLVD
501: SQFQKEIVAE LLNHRGGGDI VKMLEESPSV ARKREKLKNS IKLLKESKDA VAAIVDQNP

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.