CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29720	Canola	cytosol, extracellular	52.74	94.39
Bra037604.1-P	Field mustard	plastid	86.29	85.84
CDY25877	Canola	plastid	86.03	80.07
AT1G53140.1	Thale cress	plastid	79.5	74.54
HORVU2Hr1G095510.1	Barley	cytosol	8.36	72.73
HORVU2Hr1G095500.1	Barley	cytosol	10.57	68.64
VIT_19s0014g02500.t01	Wine grape	plastid	65.54	59.9
KRH26094	Soybean	plastid	62.14	59.2
KRH55251	Soybean	plastid	61.1	58.87
PGSC0003DMT400032399	Potato	plastid	62.4	57.94
Solyc07g063080.2.1	Tomato	plastid	62.27	57.54
HORVU1Hr1G001520.1	Barley	cytosol	6.27	53.33
TraesCS3B01G307100.1	Wheat	plastid	56.14	52.63
TraesCS3A01G273500.1	Wheat	plastid	56.14	52.63
TraesCS3D01G272800.1	Wheat	plastid	55.87	52.39
Os01t0748000-00	Rice	plastid	56.14	52.31
GSMUA_Achr2P09480_001	Banana	plastid	55.61	52.08
EES03602	Sorghum	plastid	54.44	50.55
Zm00001d043451_P001	Maize	plastid	54.05	50.3
HORVU3Hr1G071340.9	Barley	cytosol, plastid	56.01	50.0
Zm00001d012752_P006	Maize	plastid	52.61	48.03
CDY29721	Canola	cytosol	4.18	20.65
CDX67529	Canola	cytosol	13.45	16.89
CDX67862	Canola	cytosol	13.32	16.72
CDY13364	Canola	cytosol	13.32	16.72
CDX99702	Canola	cytosol	13.32	16.72
CDY25074	Canola	cytosol	13.19	16.56
CDY27661	Canola	cytosol	13.19	16.56
CDY30477	Canola	cytosol	12.14	15.05
CDY23444	Canola	cytosol	12.01	14.89
CDY42672	Canola	cytosol	11.88	14.56
CDX89053	Canola	cytosol	11.88	14.54
CDX84001	Canola	cytosol	11.62	14.5
CDY52026	Canola	cytosol	11.62	14.5
CDX71832	Canola	cytosol	11.75	14.4
CDY33737	Canola	cytosol	11.49	14.33
CDX81675	Canola	cytosol	11.49	14.33
CDY41188	Canola	cytosol	11.62	14.24
CDY23281	Canola	cytosol	7.31	14.14
CDX94910	Canola	cytosol	8.36	13.47
CDY47216	Canola	cytosol	9.14	13.01
CDY35022	Canola	cytosol	4.83	12.89
CDY53046	Canola	cytosol	11.23	12.76
CDY35023	Canola	cytosol	5.61	12.39
CDY47217	Canola	cytosol	8.22	12.26
CDY34120	Canola	cytosol	10.31	12.08
CDY53048	Canola	cytosol	7.83	12.0
CDY24536	Canola	cytosol	10.18	11.93
CDY02039	Canola	cytosol, plastid	8.62	11.81
CDY33414	Canola	cytosol	11.88	11.71
CDY20643	Canola	cytosol	9.66	11.69
CDY46101	Canola	cytosol	12.14	11.58
CDY42203	Canola	cytosol	11.88	11.58
CDX68994	Canola	cytosol	12.27	11.56
CDY31035	Canola	cytosol	9.27	11.34
CDX72418	Canola	cytosol	12.14	11.19
CDX75370	Canola	cytosol	12.27	11.19
CDY48440	Canola	cytosol	11.62	11.03
CDY28314	Canola	cytosol	11.49	10.92
CDY03289	Canola	cytosol	7.31	10.61
CDY34117	Canola	cytosol	7.31	10.61
CDY04455	Canola	cytosol	11.75	9.8
CDY45889	Canola	cytosol	11.62	9.67
CDX93442	Canola	cytosol	11.49	9.66
CDY34897	Canola	cytosol	11.36	9.51
CDY44550	Canola	cytosol	11.62	9.23
CDY36456	Canola	cytosol	2.22	9.14
CDY27283	Canola	cytosol	9.01	9.04
CDX94909	Canola	mitochondrion	8.36	8.8
CDY24530	Canola	cytosol, nucleus, plasma membrane	6.53	7.89
CDY53047	Canola	cytosol	0.91	7.22

Protein Annotations

EnsemblPlants:CDY50514	EnsemblPlantsGene:GSBRNA2T00096921001	Gene3D:3.40.50.300	InterPro:Dynamin_SF	InterPro:P-loop_NTPase	PANTHER:PTHR11566
PANTHER:PTHR11566:SF44	PFAM:PF00350	PRINTS:PR00195	ProteinID:CDY50514	ProteinID:CDY50514.1	SEG:seg
SUPFAM:SSF52540	UniParc:UPI0004EE25CD	UniProt:A0A078IMB3	MapMan:35.1	:	:

Description

BnaC06g10080DBnaC06g10080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMB3]

Coordinates

chrLK032919:+:63227..66334

Molecular Weight (calculated)

84375.5 Da

IEP (calculated)

9.029

GRAVY (calculated)

-0.243

Length

766 amino acids

Sequence
(BLAST)

001: MANSNSYLTT PTKTPSSRRN NQSQSKMQSH SQDPATSESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMALLRKT KTALSMPTLP ISLSSILLGL FLRQRKESLR PHLMKSYRWS SHWLLLHIAS SCSFSRVVWS GALLCGLMLF VRLIQASGGR LLLSPSLIIA
201: SRSLMIVVKL IVTSVLVGTL GRTLVLTLWP CLKTGALSQT MSFVDMDVIR HLREGVKGGF DEEKFRSHIG FGSLRDFLES ELQKRYKDAA PATLALLEQR
301: CSEVTDDMLR MDMKIQATSD VAHLRKAAML YMASISNHGA LIDGAANPAP EQWGKTTEEE RGESGIGSWP GVCLDIKPPN AVLRLYGGAA FERVIHEFRC
401: AAYSIECPPV SREKVANILL AHAGRGGGRG VTEASAEIAR TAARSWLAPL LDTACDRLAF VLGSLFEIAL ERNLNQNSEY EKKAENMDGY VGFHAALRNC
501: YSRFVKNLAK QCKQLVRHHL DSVTSPYSMA CYESDYHQGG AFGSYYKPNQ ASGIGSFCFE LSDTGRDEPK KDQENIPPEK SKAQETTPGK GEETHITVPE
601: TPSPDQPCEI GYDLVKKEIG NGHHHDGGGA RKRVARMGGN RNIQPLRIQN GGGGLLFGTT ENGMKSSSAY TEICSSAAQH FARIREVLVE RSVTSTLNSG
701: FLTPCRDRLV VALGVDLFAV NDEKFMDLFV APGAIDVLQN ERQQLQKRQK ILHSCLTEFK TVSRSL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.