CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX93442
CDX94909
CDX94910
CDY04455	plasma membrane
CDY20643
CDY27283	plasma membrane
CDY31035
CDY34897
CDY44550	plasma membrane
CDY45889	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10290.1	CDX93442	AT1G10290.1	25462567
AT1G10290.1	CDX94909	AT1G10290.1	25462567
AT1G10290.1	CDX94910	AT1G10290.1	25462567
AT1G10290.1	CDY20643	AT1G10290.1	25462567
AT1G10290.1	CDY31035	AT1G10290.1	25462567
AT1G10290.1	CDY34897	AT1G10290.1	25462567
AT1G10290.1	CDY04455	AT1G59610.1	25462567
AT1G10290.1	CDY27283	AT1G59610.1	25462567
AT1G10290.1	CDY44550	AT1G59610.1	25462567
AT1G10290.1	CDY45889	AT1G59610.1	25462567
AT1G10290.1	CDY04455	AT1G59610.1	25462567
AT1G10290.1	CDY27283	AT1G59610.1	25462567
AT1G10290.1	CDY44550	AT1G59610.1	25462567
AT1G10290.1	CDY45889	AT1G59610.1	25462567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31035	Canola	cytosol	97.0	98.08
CDX94910	Canola	cytosol	68.25	90.95
VIT_15s0107g00170.t01	Wine grape	cytosol	26.22	70.64
Bra018449.1-P	Field mustard	cytosol	97.31	67.47
CDX93442	Canola	cytosol	92.89	64.54
CDY34897	Canola	cytosol	91.94	63.61
AT1G10290.1	Thale cress	cytosol	91.79	63.57
CDY04455	Canola	cytosol	88.94	61.33
CDY45889	Canola	cytosol	88.63	60.98
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	25.43	60.75
CDY44550	Canola	cytosol	89.1	58.51
CDY27283	Canola	cytosol	69.19	57.41
KXG25176	Sorghum	cytosol	67.61	56.91
CDX94909	Canola	mitochondrion	63.98	55.71
Os08t0425100-01	Rice	plasma membrane	67.14	55.48
VIT_18s0089g00350.t01	Wine grape	cytosol	80.73	54.89
KRH36411	Soybean	endoplasmic reticulum, nucleus	79.15	54.34
KRH27552	Soybean	cytosol	78.99	54.23
GSMUA_Achr1P18350_001	Banana	cytosol	76.46	54.14
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	76.94	53.34
GSMUA_Achr7P05530_001	Banana	nucleus	77.25	53.09
Zm00001d037279_P005	Maize	plasma membrane	76.46	53.01
GSMUA_Achr4P20040_001	Banana	cytosol	76.62	52.77
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	75.2	52.77
TraesCS7D01G200900.1	Wheat	golgi, unclear	75.04	52.6
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	74.88	52.49
TraesCS7B01G104500.1	Wheat	golgi, unclear	74.88	52.49
Zm00001d017979_P002	Maize	extracellular, mitochondrion	76.3	52.44
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	75.51	52.35
Os06t0247800-01	Rice	plasma membrane	75.2	52.25
EES05560	Sorghum	nucleus	75.83	52.12
GSMUA_Achr3P01090_001	Banana	nucleus	74.72	51.53
Os02t0738900-01	Rice	plasma membrane	74.25	50.92
TraesCS6D01G291700.1	Wheat	nucleus	72.04	50.5
TraesCS6A01G312300.3	Wheat	nucleus	72.51	50.44
TraesCS6B01G342500.2	Wheat	cytosol	72.51	49.73
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	72.83	47.48
Zm00001d032256_P001	Maize	cytosol	63.03	42.9
Zm00001d051815_P002	Maize	cytosol	28.91	33.33
CDY42672	Canola	cytosol	25.12	25.44
CDX71832	Canola	cytosol	25.12	25.44
CDX89053	Canola	cytosol	25.12	25.4
CDY41188	Canola	cytosol	24.96	25.28
CDY25074	Canola	cytosol	24.17	25.08
CDX67862	Canola	cytosol	24.01	24.92
CDX99702	Canola	cytosol	23.7	24.59
CDX81675	Canola	cytosol	23.7	24.43
CDY33737	Canola	cytosol	23.7	24.43
CDX67529	Canola	cytosol	23.54	24.43
CDY13364	Canola	cytosol	23.54	24.43
CDY27661	Canola	cytosol	23.54	24.43
CDY23444	Canola	cytosol	23.7	24.27
CDY30477	Canola	cytosol	23.54	24.11
CDX84001	Canola	cytosol	23.38	24.1
CDY52026	Canola	cytosol	23.38	24.1
CDY35022	Canola	cytosol	8.53	18.82
CDY35023	Canola	cytosol	9.64	17.58
CDY29721	Canola	cytosol	3.95	16.13
CDY47216	Canola	cytosol	13.43	15.8
CDY36456	Canola	cytosol	4.58	15.59
CDY53048	Canola	cytosol	12.16	15.4
CDY48440	Canola	cytosol	18.96	14.87
CDY28314	Canola	cytosol	18.8	14.76
CDX68994	Canola	cytosol	18.96	14.76
CDY46101	Canola	cytosol	18.64	14.69
CDY47217	Canola	cytosol	11.69	14.4
CDX72418	Canola	cytosol	18.64	14.2
CDX75370	Canola	cytosol	18.8	14.17
CDY24536	Canola	cytosol	13.9	13.46
CDY34120	Canola	cytosol	13.9	13.46
CDY02039	Canola	cytosol, plastid	11.85	13.42
CDY23281	Canola	cytosol	8.37	13.38
CDY53046	Canola	cytosol	14.06	13.2
CDY03289	Canola	cytosol	10.58	12.69
CDY34117	Canola	cytosol	10.58	12.69
CDY33414	Canola	cytosol	14.69	11.97
CDY42203	Canola	cytosol	14.69	11.83
CDY25877	Canola	plastid	14.22	10.94
HORVU4Hr1G074040.2	Barley	nucleus	4.27	10.55
HORVU5Hr1G092990.14	Barley	cytosol	4.27	10.19
CDY50514	Canola	plastid	11.69	9.66
CDY24530	Canola	cytosol, nucleus, plasma membrane	8.85	8.83
HORVU4Hr1G073960.12	Barley	cytosol	5.37	8.52
CDY29720	Canola	cytosol, extracellular	3.16	4.67
CDY53047	Canola	cytosol	0.32	2.06

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:22.1.7.2	Gene3D:3.40.50.300	GO:A0A078G7Q3	UniProt:A0A078G7Q3
EnsemblPlants:CDY20643	ProteinID:CDY20643	ProteinID:CDY20643.1	InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF
InterPro:Dynamin_central	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00012824001	InterPro:G_DYNAMIN_dom	InterPro:IPR001849	InterPro:IPR011993
InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031	InterPro:PH-like_dom_sf	InterPro:PH_domain
PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS50003	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57
SMART:SM00053	SUPFAM:SSF50729	SUPFAM:SSF52540	UniParc:UPI0004EDFCC9	SEG:seg	:

Description

BnaC08g14150DBnaC08g14150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7Q3]

Coordinates

chrLK032110:-:422740..427499

Molecular Weight (calculated)

68912.5 Da

IEP (calculated)

9.589

GRAVY (calculated)

-0.372

Length

633 amino acids

Sequence
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSRRPATFLN VVALGNVGAG KSAVLNSLIG HAILPTGENG ATRAPIIVDL SRESSLGSKA IILQIDNKSQ
101: QVSATALRHN LQDRLGKAAP GKNRDEIYLK LRTSTAPPLK LVDLPGLDQR IVDDSMIAEY AQHNDAILLV IIPASQASEI SSSRALKIAK EHDPESTRTV
201: GIIGKIDQAE GNAKALAAVQ ALLSNQGPPK TTDIPWVALI GQSVSIASAA QSGSGENSLE TAWRAESESL NKTLTGAPQS KLGRNALVET LASQIRSRMK
301: LRLPNILSGL QGKSQMVQNE LARLGEQLVD SAEGTRAIAL ELCREFEEKF LLHLAGGEGS GWKVVASFEG NFPNRIKQLP LDRHFDLNNV KRVVLEADGY
401: QPYLISPEKG LRSLIKIVLE MAKDPARLCV DEVHRVLVDI VSAAANATPG LGRYPPFKRE VVAIASAALD GFKNEAKKMV VALVDMERAF VPPQHFIRLV
501: QRRMERQRRE DELKGRSSKK GQDAEQSLLS RASSPQQDGS MKSMKDKPSP QDKETPEVSG LKTAGPEGEI TAGYLMKKSA KTNGWSRRWF VLNEKTGKLG
601: YTKKQEERNF RGTITLEVSF SSHDFFTRVK GEL

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.