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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038229.1-P Field mustard cytosol 99.49 98.35
CDY42203 Canola cytosol 99.49 98.35
AT3G19720.1 Thale cress cytosol 95.88 95.88
KRH42202 Soybean nucleus 76.58 79.23
VIT_12s0055g00490.t01 Wine grape cytosol 78.76 79.17
Solyc10g047050.1.1 Tomato nucleus 76.58 77.17
PGSC0003DMT400014025 Potato cytosol 76.58 77.17
GSMUA_Achr10P... Banana cytosol 63.45 72.61
KRH58326 Soybean plasma membrane 42.08 65.53
CDY30477 Canola cytosol 15.96 20.06
CDY23444 Canola cytosol 15.96 20.06
CDY36456 Canola cytosol 4.76 19.89
CDX84001 Canola cytosol 15.7 19.87
CDY52026 Canola cytosol 15.7 19.87
CDX81675 Canola cytosol 15.57 19.71
CDY33737 Canola cytosol 15.57 19.71
CDX89053 Canola cytosol 15.83 19.65
CDY41188 Canola cytosol 15.7 19.52
CDY42672 Canola cytosol 15.7 19.52
CDY35022 Canola cytosol 7.21 19.51
CDY27661 Canola cytosol 15.32 19.51
CDX71832 Canola cytosol 15.57 19.36
CDY13364 Canola cytosol 15.19 19.34
CDX67529 Canola cytosol 15.19 19.34
CDX99702 Canola cytosol 15.19 19.34
CDX67862 Canola cytosol 15.19 19.34
CDY25074 Canola cytosol 15.19 19.34
CDY28314 Canola cytosol 18.53 17.87
CDY47216 Canola cytosol 12.36 17.84
CDX68994 Canola cytosol 18.53 17.71
CDY53048 Canola cytosol 11.33 17.6
CDY48440 Canola cytosol 18.28 17.6
CDY35023 Canola cytosol 7.85 17.58
CDY29721 Canola cytosol 3.47 17.42
CDY46101 Canola cytosol 17.89 17.31
CDY47217 Canola cytosol 11.33 17.12
CDX75370 Canola cytosol 18.28 16.9
CDX72418 Canola cytosol 18.02 16.85
CDY02039 Canola cytosol, plastid 11.97 16.64
CDX94910 Canola cytosol 10.17 16.63
CDY24536 Canola cytosol 13.9 16.51
CDY34120 Canola cytosol 13.77 16.36
CDY53046 Canola cytosol 13.9 16.02
CDY34117 Canola cytosol 10.68 15.72
CDY03289 Canola cytosol 10.68 15.72
CDY23281 Canola cytosol 7.72 15.15
CDY31035 Canola cytosol 11.84 14.7
CDY20643 Canola cytosol 11.97 14.69
CDY25877 Canola plastid 14.93 14.09
CDY34897 Canola cytosol 14.29 12.13
CDY45889 Canola cytosol 14.16 11.96
CDY50514 Canola plastid 11.71 11.88
CDY04455 Canola cytosol 13.9 11.76
CDX93442 Canola cytosol 13.64 11.64
CDY44550 Canola cytosol 14.03 11.31
CDY27283 Canola cytosol 10.68 10.88
CDY24530 Canola cytosol, nucleus, plasma membrane 8.62 10.57
CDX94909 Canola mitochondrion 8.62 9.22
CDY53047 Canola cytosol 1.03 8.25
CDY29720 Canola cytosol, extracellular 3.6 6.54
Protein Annotations
MapMan:13.6.1.3Gene3D:3.40.50.300GO:A0A078H7E6UniProt:A0A078H7E6EnsemblPlants:CDY33414ProteinID:CDY33414
ProteinID:CDY33414.1InterPro:Dynamin_GTPaseInterPro:Dynamin_SFGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00054315001InterPro:G_DYNAMIN_dom
InterPro:IPR030381InterPro:P-loop_NTPasePFAM:PF00350PRINTS:PR00195PFscan:PS51718PANTHER:PTHR11566
PANTHER:PTHR11566:SF78SMART:SM00053SUPFAM:SSF52540UniParc:UPI0004EB6FBCSEG:seg:
Description
BnaC01g33110DBnaC01g33110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7E6]
Coordinates
chrLK032314:-:14180..19070
Molecular Weight (calculated)
86940.2 Da
IEP (calculated)
6.575
GRAVY (calculated)
-0.291
Length
777 amino acids
Sequence
(BLAST)
001: MSSDSSAPKS VTVEEMAAEE DAAIEERYSL YEAYNELHAL AQELETPFEA PAVLVVGQQT DGKSALVEAL MGFQFNHVGG GTKTRRPITL HMKYDPQCQF
101: PLCHLGSDDD PSVALPKSLS QIQAYIEAEN MRLEQEPSPF SAKEIIVKVQ YKYCPNLTII DTPGLIAPAP GLKNRALQVQ ARAVEALVRA KMQHKEFIIL
201: CLEDSSDWSI ATTRRIVMQV DPELSRTIVV STKLDTKIPQ FSCSSDVEVF LSPPASALDS SLLGDSPFFT SVPSGRVGYG HDSVYKSNDE FKQAVSLREI
301: EDIASLEKKL GRVLTKQEKN RIGVSKLRLF LEELLWKRYK ESVPLIIPLL GKEYRSTVRK LDTVSKELSS LDEAKLKERG RTFHDLFLTK LSLLLKGTVV
401: APPDKFGETL QDERTQGGSF VGTDGLQFPH KLIPNAGMRL YGGAQYHRAM AEFRFLVGAI KCPPITREEI VNACGVEDIH DGTNYSRTAC VIAVAKARDT
501: FEPFLHQLGA RLLHILKRLL PISVYLLQKE GEYLSGHEVF LKRVASAFNS FVESTEKSCR DKCMEDLAST TRYVTWSLHN KNRAGLRQFL DSFGGTEQVA
601: TSGNPLGFSL PQDAPGGTTD TKSRSDVKLS QLASNIDSGS SLQTTETRLA DLLDSTLWNR KLAPSSERIV YALVQQIFQG IREYFLASAE LKFNCFLLMP
701: IVDKLPALLR EELENAFEDD LDSIFDITNL RQSLDQKKRS TEIELRRIKR IKEKFRVMNE KLNSHEFAQN LNPPSLP
Best Arabidopsis Sequence Match ( AT3G19720.1 )
(BLAST)
001: MAEVSAKSVT VEEMAEEDDA AIEERWSLYE AYNELHALAQ ELETPFEAPA VLVVGQQTDG KSALVEALMG FQFNHVGGGT KTRRPITLHM KYDPQCQFPL
101: CHLGSDDDPS VSLPKSLSQI QAYIEAENMR LEQEPCSPFS AKEIIVKVQY KYCPNLTIID TPGLIAPAPG LKNRALQVQA RAVEALVRAK MQHKEFIILC
201: LEDSSDWSIA TTRRIVMQVD PELSRTIVVS TKLDTKIPQF SCSSDVEVFL SPPASALDSS LLGDSPFFTS VPSGRVGYGQ DSVYKSNDEF KQAVSLREME
301: DIASLEKKLG RLLTKQEKSR IGISKLRLFL EELLWKRYKE SVPLIIPLLG KEYRSTVRKL DTVSKELSSL DEAKLKERGR TFHDLFLTKL SLLLKGTVVA
401: PPDKFGETLQ DERTQGGAFV GTDGLQFSHK LIPNAGMRLY GGAQYHRAMA EFRFLVGAIK CPPITREEIV NACGVEDIHD GTNYSRTACV IAVAKARETF
501: EPFLHQLGAR LLHILKRLLP ISVYLLQKEG EYLSGHEVFL KRVASAFNSF VESTEKSCRD KCMEDLASTT RYVTWSLHNK NRAGLRQFLD SFGGTEHNTT
601: SGNAIGFSLP QDALGGTTDT KSRSDVKLSH LASNIDSGSS IQTTEMRLAD LLDSTLWNRK LAPSSERIVY ALVQQIFQGI REYFLASAEL KFNCFLLMPI
701: VDKLPALLRE ELENAFEDDL DSIFDITNLR QSLDQKKRST EIELRRIKRI KEKFRVMNEK LNSHEFAQNL KAPSVQH
Arabidopsis Description
ARC5Dynamin-like protein ARC5 [Source:UniProtKB/Swiss-Prot;Acc:Q84N64]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.