CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX93442
CDX94909
CDX94910
CDY04455	plasma membrane
CDY20643
CDY27283	plasma membrane
CDY31035
CDY34897
CDY44550	plasma membrane
CDY45889	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10290.1	CDX93442	AT1G10290.1	25462567
AT1G10290.1	CDX94909	AT1G10290.1	25462567
AT1G10290.1	CDX94910	AT1G10290.1	25462567
AT1G10290.1	CDY20643	AT1G10290.1	25462567
AT1G10290.1	CDY31035	AT1G10290.1	25462567
AT1G10290.1	CDY34897	AT1G10290.1	25462567
AT1G10290.1	CDY04455	AT1G59610.1	25462567
AT1G10290.1	CDY27283	AT1G59610.1	25462567
AT1G10290.1	CDY44550	AT1G59610.1	25462567
AT1G10290.1	CDY45889	AT1G59610.1	25462567
AT1G10290.1	CDY04455	AT1G59610.1	25462567
AT1G10290.1	CDY27283	AT1G59610.1	25462567
AT1G10290.1	CDY44550	AT1G59610.1	25462567
AT1G10290.1	CDY45889	AT1G59610.1	25462567

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27283	Canola	cytosol	85.69	81.65
CDX93442	Canola	cytosol	98.07	78.27
Bra019950.1-P	Field mustard	cytosol	98.07	75.93
AT1G10290.1	Thale cress	cytosol	92.3	73.41
CDY34897	Canola	cytosol	91.88	73.01
CDY04455	Canola	cytosol	89.96	71.24
CDY45889	Canola	cytosol	89.96	71.09
CDY44550	Canola	cytosol	90.1	67.95
CDY31035	Canola	cytosol	55.71	64.7
CDY20643	Canola	cytosol	55.71	63.98
VIT_18s0089g00350.t01	Wine grape	cytosol	78.4	61.22
KRH27552	Soybean	cytosol	76.2	60.09
KRH36411	Soybean	endoplasmic reticulum, nucleus	76.07	59.98
GSMUA_Achr7P05530_001	Banana	nucleus	74.97	59.17
GSMUA_Achr4P20040_001	Banana	cytosol	74.28	58.76
GSMUA_Achr1P18350_001	Banana	cytosol	72.08	58.61
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	71.66	57.06
Zm00001d037279_P005	Maize	plasma membrane	71.66	57.06
GSMUA_Achr3P01090_001	Banana	nucleus	71.53	56.64
CDX94910	Canola	cytosol	37.0	56.63
Zm00001d044757_P006	Maize	cytosol, nucleus, plasma membrane	70.98	56.52
TraesCS7D01G200900.1	Wheat	golgi, unclear	70.15	56.48
TraesCS7A01G198100.1	Wheat	cytosol, nucleus, plasma membrane	70.15	56.48
EES05560	Sorghum	nucleus	71.53	56.46
Zm00001d017979_P002	Maize	extracellular, mitochondrion	71.25	56.24
TraesCS7B01G104500.1	Wheat	golgi, unclear	69.74	56.15
Os06t0247800-01	Rice	plasma membrane	70.29	56.09
HORVU7Hr1G040670.2	Barley	cytosol, nucleus, plasma membrane	69.46	55.99
TraesCS6D01G291700.1	Wheat	nucleus	69.46	55.92
TraesCS6A01G312300.3	Wheat	nucleus	69.33	55.38
Os02t0738900-01	Rice	plasma membrane	69.88	55.04
Zm00001d051815_P002	Maize	cytosol	40.3	53.37
HORVU6Hr1G077000.1	Barley	cytosol, mitochondrion, nucleus	69.88	52.32
TraesCS6B01G342500.2	Wheat	cytosol	66.02	52.0
Os08t0425100-01	Rice	plasma membrane	53.09	50.39
KXG25176	Sorghum	cytosol	51.86	50.13
Zm00001d032256_P001	Maize	cytosol	54.88	42.9
CDX71832	Canola	cytosol	18.43	21.44
CDY41188	Canola	cytosol	18.29	21.28
CDX89053	Canola	cytosol	18.16	21.09
CDY42672	Canola	cytosol	18.02	20.96
CDY25074	Canola	cytosol	17.06	20.33
CDY33737	Canola	cytosol	17.06	20.2
CDX81675	Canola	cytosol	17.06	20.2
CDX67862	Canola	cytosol	16.92	20.16
CDX84001	Canola	cytosol	16.92	20.03
CDY52026	Canola	cytosol	16.92	20.03
CDY30477	Canola	cytosol	16.92	19.9
CDY23444	Canola	cytosol	16.92	19.9
CDY27661	Canola	cytosol	16.51	19.67
CDX99702	Canola	cytosol	16.37	19.51
CDX67529	Canola	cytosol	16.37	19.51
CDY13364	Canola	cytosol	16.23	19.34
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	6.46	17.74
VIT_15s0107g00170.t01	Wine grape	cytosol	5.5	17.02
CDY53047	Canola	cytosol	2.06	15.46
CDX68994	Canola	cytosol	16.09	14.39
CDY48440	Canola	cytosol	15.54	14.0
CDY28314	Canola	cytosol	15.41	13.9
CDY46101	Canola	cytosol	15.27	13.82
CDX75370	Canola	cytosol	15.96	13.81
CDX72418	Canola	cytosol	15.27	13.36
CDY34117	Canola	cytosol	9.63	13.26
CDY03289	Canola	cytosol	9.63	13.26
CDY53046	Canola	cytosol	9.63	10.39
CDY24536	Canola	cytosol	9.22	10.24
CDY34120	Canola	cytosol	9.22	10.24
CDY47216	Canola	cytosol	6.88	9.29
CDY02039	Canola	cytosol, plastid	6.88	8.94
CDY47217	Canola	cytosol	6.19	8.75
CDY42203	Canola	cytosol	9.35	8.65
CDY33414	Canola	cytosol	9.22	8.62
CDY50514	Canola	plastid	8.8	8.36
CDY53048	Canola	cytosol	5.64	8.2
CDY36456	Canola	cytosol	2.06	8.06
HORVU4Hr1G073960.12	Barley	cytosol	4.13	7.52
CDY29720	Canola	cytosol, extracellular	4.4	7.48
HORVU4Hr1G074040.2	Barley	nucleus	2.61	7.42
CDY25877	Canola	plastid	8.39	7.41
HORVU5Hr1G092990.14	Barley	cytosol	2.61	7.17
CDY29721	Canola	cytosol	1.38	6.45
CDY23281	Canola	cytosol	3.3	6.06
CDY24530	Canola	cytosol, nucleus, plasma membrane	5.23	5.99
CDY35023	Canola	cytosol	2.75	5.76
CDY35022	Canola	cytosol	1.1	2.79

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:22.1.7.2	GO:A0A078E2T3	EnsemblPlants:CDX94909	ProteinID:CDX94909
ProteinID:CDX94909.1	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00100382001	InterPro:G_DYNAMIN_dom	InterPro:IPR001849	InterPro:IPR011993	InterPro:IPR020850	InterPro:IPR030381
PFAM:PF00169	PFAM:PF01031	PFAM:PF02212	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003
PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57	SMART:SM00233	SUPFAM:SSF50729
UniParc:UPI0004EE5D78	SEG:seg	:	:	:	:

Description

BnaC05g07620D

Coordinates

chrLK031886:-:92616..97917

Molecular Weight (calculated)

79503.9 Da

IEP (calculated)

10.021

GRAVY (calculated)

-0.547

Length

727 amino acids

Sequence
(BLAST)

001: MFNLPMTLTL LGTRTVGIIR KLGQAAENPK ALPAVQALLS NQGPPKTTDI PWVALIGQSV AIASAQSGSG ENSLETAWRA ESESLKSILT GAPQSKLGRV
101: ALVDTLASQI RSRMKLRLPS ILSGLQGKSQ IVQNELARLG EQLVNSAEGT RAIALELCRE FEEKFLLHLA GGEGSGWKVV ASFEGNFPNR IKELPLDRHF
201: DLNNVKRVVL EADGYQPYLI SPEKGLRSLI KIVLELAKDP ARLCVDEVHR VLVDIVSASA NATPGLGRYP PFKREVVAIA SAALDGFKNE AKKMVVALVD
301: MERAFVPPQH FIRLVQRRME RQRREDELKG RSSKKGPDAE QSLLSRAASP QPDGSMKSMK DKPSPQDKET PEVSGLKTAG PEGEITAGYL MKKSAKTNGW
401: SRRWFVLNEK TGKLGYTKKQ EERNFRGTIT LEECTIEEIP EEEVEKSKSS KDKKANGPDP KGPGLIFKIT CKVPYKTVLK AHNSLVLKAE SAVDKNEWIN
501: KLQKVIQARG GQVGNISMRQ SFSEGSLDKM VRKPVDPEEE LRWMSQEVRG YVEAVLNSLA ANVPKAVVLC QVEKSKEDML NQLYSSISAI GNERIESLIQ
601: EDQNVKGKRE RYLKQSSLLS KLTRQLSVHD NRAAAASSWS DNGSTESSPK TSGGSSGDDW MNAFNAAGNG GSDSLSRYGS GGHSHSRRYS DPAQNGDLPS
701: PGSGSSRRTT PNRLPPAPPQ GGSSYRY

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.