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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47217 Canola cytosol 92.6 90.08
CDY47216 Canola cytosol 86.6 80.48
Bra027151.1-P Field mustard cytosol 97.4 72.15
CDY36456 Canola cytosol 25.0 67.2
CDY53046 Canola cytosol 86.6 64.24
AT1G60500.1 Thale cress mitochondrion 82.4 61.58
PGSC0003DMT400088564 Potato cytosol 15.0 60.98
CDY34120 Canola cytosol 78.4 59.94
CDY24536 Canola cytosol 78.0 59.63
KRH11082 Soybean cytosol 15.8 54.11
CDY34117 Canola cytosol 57.0 53.98
CDY03289 Canola cytosol 57.0 53.98
CDY02039 Canola cytosol, plastid 59.0 52.77
Solyc04g072030.1.1 Tomato cytosol 61.2 45.33
PGSC0003DMT400064542 Potato cytosol 60.4 44.74
TraesCS4A01G213700.1 Wheat cytosol 51.4 43.41
TraesCS4D01G217900.1 Wheat cytosol 57.4 43.29
KXG39737 Sorghum cytosol 56.6 43.27
TraesCS4B01G217700.1 Wheat cytosol 55.2 43.26
Zm00001d028495_P001 Maize cytosol 58.0 43.03
PGSC0003DMT400050652 Potato cytosol 52.8 42.93
Os03t0260000-01 Rice cytosol 57.8 42.63
EER95148 Sorghum cytosol 57.6 42.54
TraesCS4A01G086700.1 Wheat cytosol 56.2 42.32
HORVU4Hr1G061820.3 Barley plastid 57.4 42.21
GSMUA_Achr8P19650_001 Banana cytosol, mitochondrion 45.8 41.11
PGSC0003DMT400072601 Potato cytosol 50.8 41.03
PGSC0003DMT400064541 Potato cytosol 49.0 40.03
Os04t0129900-01 Rice cytosol 54.4 39.77
TraesCS4D01G098800.1 Wheat cytosol 54.4 39.77
PGSC0003DMT400095128 Potato cytosol 33.6 38.27
Zm00001d028497_P001 Maize cytosol 47.6 38.14
CDY23281 Canola cytosol 29.4 37.12
Solyc11g069980.1.1 Tomato cytosol 59.0 36.92
PGSC0003DMT400064491 Potato cytosol 20.8 26.26
CDY35022 Canola cytosol 14.8 25.78
CDY42672 Canola cytosol 27.6 22.08
CDX89053 Canola cytosol 27.6 22.04
CDX84001 Canola cytosol 26.8 21.82
CDY52026 Canola cytosol 26.8 21.82
CDY41188 Canola cytosol 27.2 21.76
CDX71832 Canola cytosol 27.2 21.76
CDY35023 Canola cytosol 15.0 21.61
CDY23444 Canola cytosol 26.6 21.52
CDY33737 Canola cytosol 26.4 21.5
CDX81675 Canola cytosol 26.4 21.5
CDX99702 Canola cytosol 26.2 21.48
CDX67529 Canola cytosol 26.2 21.48
CDY25074 Canola cytosol 26.2 21.48
CDY27661 Canola cytosol 26.2 21.48
CDX67862 Canola cytosol 26.2 21.48
CDY30477 Canola cytosol 26.4 21.36
CDY13364 Canola cytosol 25.8 21.15
CDY24530 Canola cytosol, nucleus, plasma membrane 25.6 20.19
CDY28314 Canola cytosol 27.6 17.12
CDY48440 Canola cytosol 27.6 17.1
CDX68994 Canola cytosol 27.4 16.85
CDY46101 Canola cytosol 27.0 16.81
CDX94910 Canola cytosol 15.8 16.63
CDX75370 Canola cytosol 27.4 16.31
CDX72418 Canola cytosol 27.0 16.25
CDY29721 Canola cytosol 4.6 14.84
CDY31035 Canola cytosol 15.4 12.3
CDY20643 Canola cytosol 15.4 12.16
CDY33414 Canola cytosol 17.6 11.33
CDY42203 Canola cytosol 17.8 11.32
CDY25877 Canola plastid 16.4 9.96
CDY04455 Canola cytosol 16.0 8.71
CDY45889 Canola cytosol 16.0 8.7
CDX93442 Canola cytosol 15.8 8.67
CDY34897 Canola cytosol 15.6 8.52
CDY44550 Canola cytosol 16.0 8.3
CDY50514 Canola plastid 12.0 7.83
CDY27283 Canola cytosol 10.8 7.08
CDX94909 Canola mitochondrion 8.2 5.64
CDY29720 Canola cytosol, extracellular 2.2 2.57
CDY53047 Canola cytosol 0.4 2.06
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1GO:A0A078IVT2UniProt:A0A078IVT2EnsemblPlants:CDY53048ProteinID:CDY53048
ProteinID:CDY53048.1InterPro:Dynamin_GTPaseInterPro:Dynamin_SFInterPro:Dynamin_centralGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00008463001
InterPro:G_DYNAMIN_domInterPro:IPR030381InterPro:P-loop_NTPasePFAM:PF00350PFAM:PF01031PRINTS:PR00195
PFscan:PS51718PANTHER:PTHR11566PANTHER:PTHR11566:SF135SMART:SM00053SUPFAM:SSF52540UniParc:UPI0004EDBB0C
Description
BnaA09g14130DBnaA09g14130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVT2]
Coordinates
chrLK033159:-:16589..18588
Molecular Weight (calculated)
55410.7 Da
IEP (calculated)
5.382
GRAVY (calculated)
0.020
Length
500 amino acids
Sequence
(BLAST)
001: MAGRNKYVVS KTSSSLAIVE ANPPANKIVP IEAPIVSSYN DRIRPLLDTV DRLRNLNVMR EGIQLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSY STEPEIWLEY GDTVVHTDEE HIAKAICAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISAMIMKYIK
201: PQESIILNVL SATVDFTTCE SIRMSRQVDK TGERTLAVVT KADMAPDGLL QKVTADDVSI GLGYVCVRNR IGEETYQEAR MQEELLFRTH PKLSLIDDDI
301: VGIPVLAQKL MLIQATMIAR CLPEIVRKIN EKMENSVLEL NKLPMVMASP GEALMTLMDI IGSAKESLLR ILIQGDFSEY PEDHKMHCTA RLAEMLSQFS
401: DNLQAHSNDV TVDFLMDEIK ILDECKCVGL PNFIPRSAFL AILSHYVDGI HSKPVEFIKK IWEYIEAVLI PVISKYAENF PQIQSSVKRA ELLSRWIWGS
Best Arabidopsis Sequence Match ( AT1G60530.1 )
(BLAST)
001: MGGSKMSNDY EIDVEAGMSS LSIVNTPIEA PIVSSYNDRI RPLLDTVDRL RNLNVMREGI QLPTIVVVGD QSSGKSSVLE SLAGINLPRG QGICTRVPLV
101: MRLQRSSSPE PEIWLEYSDK VVPTDEEHVA EAICAATDVI AGTGEGVSDT PLTLSVKKNN VPDLTMVDLP GITRVPVNGQ PENIYEQISR MIMKYIEPQE
201: SIILNVLSAT VDFTTCESIR MSRQVDKTGE RTLAVVTKAD MAPEGLLQKV TADDVSIGLG YICVRNRIGE ETYEEARVQE DLLFRTHPLL SLIDGDIVGI
301: L
Arabidopsis Description
DRP4APutative dynamin-related protein 4A [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP56]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.