CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028495_P001	Maize	cytosol	92.32	92.73
KXG39737	Sorghum	cytosol	78.58	81.35
AT1G60530.1	Thale cress	cytosol	29.39	66.11
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	49.34	59.96
CDY36456	Canola	cytosol	16.4	59.68
CDY47217	Canola	cytosol	43.87	57.78
PGSC0003DMT400088564	Potato	cytosol	10.49	57.72
CDY53048	Canola	cytosol	42.54	57.6
PGSC0003DMT400064542	Potato	cytosol	56.87	57.04
Solyc04g072030.1.1	Tomato	cytosol	56.72	56.89
CDY47216	Canola	cytosol	45.2	56.88
KRH21193	Soybean	cytosol	41.65	56.85
KRH21190	Soybean	cytosol	54.8	55.79
KRH42928	Soybean	cytosol	48.89	55.26
PGSC0003DMT400072601	Potato	cytosol	50.52	55.25
CDY34120	Canola	cytosol	52.44	54.28
AT1G60500.1	Thale cress	mitochondrion	53.62	54.26
CDY24536	Canola	cytosol	52.29	54.13
KRH11082	Soybean	cytosol	11.67	54.11
CDY53046	Canola	cytosol	53.77	54.01
Bra031502.1-P	Field mustard	cytosol	52.14	53.98
PGSC0003DMT400050652	Potato	cytosol	48.89	53.82
KRH59040	Soybean	cytosol	53.62	53.78
PGSC0003DMT400064541	Potato	cytosol	48.6	53.76
Bra027151.1-P	Field mustard	cytosol	53.32	53.48
Bra031505.1-P	Field mustard	cytosol	45.05	53.32
PGSC0003DMT400095128	Potato	cytosol	33.68	51.94
CDY02039	Canola	cytosol, plastid	42.39	51.34
CDY34117	Canola	cytosol	39.88	51.14
CDY03289	Canola	cytosol	39.88	51.14
PGSC0003DMT400065607	Potato	cytosol	15.21	50.24
Bra010250.1-P	Field mustard	cytosol	28.66	49.11
PGSC0003DMT400064491	Potato	cytosol	27.92	47.73
CDY23281	Canola	cytosol	27.92	47.73
Solyc11g069980.1.1	Tomato	cytosol	54.51	46.18
CDY53047	Canola	cytosol	6.06	42.27
PGSC0003DMT400094747	Potato	cytosol	19.94	32.69
Bra031511.1-P	Field mustard	cytosol	26.29	28.8
CDY24530	Canola	cytosol, nucleus, plasma membrane	26.74	28.55
EES19921	Sorghum	cytosol	23.34	25.94
KXG37727	Sorghum	cytosol, mitochondrion	23.19	25.65
EES01270	Sorghum	cytosol	22.6	25.12
EER98546	Sorghum	cytosol	22.9	24.84
KXG38886	Sorghum	cytosol	21.71	23.33
EES04116	Sorghum	cytosol	25.26	20.88
OQU81360	Sorghum	cytosol	22.3	19.97
EES16755	Sorghum	cytosol	17.87	15.98
EES03602	Sorghum	plastid	16.69	13.7
KXG25176	Sorghum	cytosol	13.44	12.1
EES05560	Sorghum	nucleus	16.4	12.05
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	15.66	11.61

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8054308	UniProt:C5WQ89	ncoils:Coil
InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central	EnsemblPlants:EER95148	ProteinID:EER95148	ProteinID:EER95148.1
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF135	SMART:SM00053	EnsemblPlantsGene:SORBI_3001G430500	SUPFAM:SSF52540	UniParc:UPI0001A831BF	RefSeq:XP_002468150.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:70949949..70952308

Molecular Weight (calculated)

74727.5 Da

IEP (calculated)

5.415

GRAVY (calculated)

-0.153

Length

677 amino acids

Sequence
(BLAST)

001: MSKKLQMGGP KQAKGATDDG KGDVAGAGGS AVTASAIAAS YDDQIRPLLD AVDRLRHLKV TQEGIQLPTI VVVGDQSSGK SSVLESLAGI SLPRGQGICT
101: RVPLVMRLQD DPSADSPKLQ LEYSNGRVVT TTEANVADVI NAATAEIAGS GKGISDAPIT LVVRKRGVPD LTLVDLPGIT RVPVQGQPED ISDQVAKIIK
201: EYIAPKESII LNVLSATVDF PTCESIRMSQ QVDRTGERTL AVVTKVDKAP EGLLEKVTMD DVHIGLGYVC VRNRIGDETY DQARVEEERL FKYHPLLSEI
301: DKSMVGIPVL AQRLMQIQAT IIAKCLPDIV KQINERLSRS SEELDQMPQD LNNVADAVRV FFHIVKQVCN SLEKVLVRGD FAEYPDDREF HGTARIAEML
401: SGYAKSLPVQ CPTNTNEAFL MEEVRILEET KGINLPNFLP RSAFLVLLKK KVETIDQVPQ DLVNGVWDYV EELVMKVLLK HSDNFPQMQS PCRRAVQTLM
501: DKARLRSAQH VKELIAMELV ADYTANPDYM KTWSEIMEGY EKFMEAVEDK TKPTRITLEG FGEVDVSHLR VYADFAGKAF DLRARLTAYW KSIVLRLVDG
601: LALHVLLSVK LLVEKDLEEE LGNELLSNKF AGVEKMLAPS PSTGTKRERL KKSIVLLRQS KEVVANIMDR ISAAGEI

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.