CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043451_P001	Maize	plastid	95.64	95.87
Os01t0748000-00	Rice	plastid	90.42	90.75
Zm00001d012752_P006	Maize	plastid	91.27	89.75
TraesCS3A01G273500.1	Wheat	plastid	87.15	88.0
TraesCS3D01G272800.1	Wheat	plastid	86.91	87.76
TraesCS3B01G307100.1	Wheat	plastid	86.3	87.15
HORVU2Hr1G095510.1	Barley	cytosol	9.09	85.23
HORVU3Hr1G071340.9	Barley	cytosol, plastid	86.55	83.22
HORVU2Hr1G095500.1	Barley	cytosol	11.88	83.05
GSMUA_Achr2P09480_001	Banana	plastid	71.88	72.49
KRH55251	Soybean	plastid	66.67	69.18
KRH26094	Soybean	plastid	67.27	69.03
VIT_19s0014g02500.t01	Wine grape	plastid	69.94	68.85
PGSC0003DMT400032399	Potato	plastid	68.36	68.36
Solyc07g063080.2.1	Tomato	plastid	67.64	67.31
AT1G53140.1	Thale cress	plastid	66.06	66.71
CDY25877	Canola	plastid	65.7	65.86
Bra038100.1-P	Field mustard	cytosol	64.48	64.88
CDY29720	Canola	cytosol, extracellular	30.79	59.35
HORVU1Hr1G001520.1	Barley	cytosol	6.42	58.89
CDY50514	Canola	plastid	50.55	54.44
CDY29721	Canola	cytosol	10.18	54.19
Bra037604.1-P	Field mustard	plastid	49.45	52.99
EES19921	Sorghum	cytosol	16.12	21.84
EES01270	Sorghum	cytosol	16.0	21.67
KXG37727	Sorghum	cytosol, mitochondrion	15.03	20.26
EER98546	Sorghum	cytosol	15.27	20.19
KXG38886	Sorghum	cytosol	14.79	19.37
KXG39737	Sorghum	cytosol	13.94	17.58
EES04116	Sorghum	cytosol	16.61	16.73
EER95148	Sorghum	cytosol	13.7	16.69
EES16755	Sorghum	cytosol	14.18	15.46
OQU81360	Sorghum	cytosol	13.82	15.08
KXG25176	Sorghum	cytosol	11.15	12.23
EES05560	Sorghum	nucleus	13.58	12.16
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	13.45	12.16

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8075569	UniProt:C5XK26	InterPro:Dynamin_GTPase	InterPro:Dynamin_SF
EnsemblPlants:EES03602	ProteinID:EES03602	ProteinID:EES03602.1	GO:GO:0000166	GO:GO:0000266	GO:GO:0000911
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0007049	GO:GO:0008017
GO:GO:0008150	GO:GO:0009504	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom
InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PRINTS:PR00195	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF44	SMART:SM00053	EnsemblPlantsGene:SORBI_3003G294500	SUPFAM:SSF52540	UniParc:UPI0001A84D79	RefSeq:XP_002458482.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:62685984..62690548

Molecular Weight (calculated)

91409.9 Da

IEP (calculated)

7.413

GRAVY (calculated)

-0.345

Length

825 amino acids

Sequence
(BLAST)

001: MAASSLSSPA ASRTPNLKSA PAPSPSPSTR RMAADAASAA AAVAAADSKA RFEAYNRLQA AAVAFGEKLP IPEIVAIGGQ SDGKSSLLEA LLGFRFNVRE
101: VEMGTRRPLV LQMVHDPTAL EPRCRFQEED SEEYGSPMVM ATAIADLIKQ RTESHLRKIQ AAVSSKPIVM RAEYAHCPNL TIIDTPGFVL KAKRGEPEST
201: PDEIRSMVKS LATPPHRLVL FLQQSSVEWC SSIWLDTLKE IDPTFRRTMI VISKFDNRLK EFTERWEVDT FLSASGYLGD NIHPFFVALP KDRGTISNEE
301: FRRQICQVDI DVLRHLRDNV KGGFNEEKYG SYIGFSCLRK YLESELQKRY KEATPATLAL LEQRCTDVSM DLTRLDSKLQ ATSDVSQLRR SAMLHAASIC
401: THLHALLDGA ADPAPEIWGK TTEEEQMHSG IGSWPGINMP VKPANSSLKL YGGAAFERVM HEFRCATYSM ECPQVSREKV ANILLAHAGR GGSSRLTEAA
501: AEIARAAARS WLAPLIDTAC DRLAFVLQSL FDLAMERNRN KDAQYHQNVE DMDSYVGFLA ALRCSYYKFV KELSKQCKQI VRHHLDSVTS PYSHICYDND
601: FLSGVGSVAN SMSRFNHFTG VTSFDLADSG SALEEAQENL PPRDQQHMTP PNKGNESKEV LRESQLTVPE TPSPDLPSDV HGGKKKDNGI PNDGGPRKRQ
701: ARMAAYTNRN HHNSMIAADD MGSKSGSSYS TICAISAQYF AKMREVLIER NVPSALNSGF LTPCRERLFL ALGFELFAVS DDKFMDMFVA PGAVDAIQNE
801: RQSLLKRQKI LLSCLNEFKN ISRAL

Best Arabidopsis Sequence Match ( AT1G53140.1 )
(BLAST)

001: MANSNTYLTT PTKTPSSRRN QQSQSKMQSH SKDPINAESR SRFEAYNRLQ AAAVAFGEKL PIPEIVAIGG QSDGKSSLLE ALLGFRFNVR EVEMGTRRPL
101: ILQMVHDLSA LEPRCRFQDE DSEEYGSPIV SATAVADVIR SRTEALLKKT KTAVSPKPIV MRAEYAHCPN LTIIDTPGFV LKAKKGEPET TPDEILSMVK
201: SLASPPHRIL LFLQQSSVEW CSSLWLDAVR EIDSSFRRTI VVVSKFDNRL KEFSDRGEVD RYLSASGYLG ENTRPYFVAL PKDRSTISND EFRRQISQVD
301: TEVIRHLREG VKGGFDEEKF RSCIGFGSLR DFLESELQKR YKEAAPATLA LLEERCSEVT DDMLRMDMKI QATSDVAHLR KAAMLYTASI SNHVGALIDG
401: AANPAPEQWG KTTEEERGES GIGSWPGVSV DIKPPNAVLK LYGGAAFERV IHEFRCAAYS IECPPVSREK VANILLAHAG RGGGRGVTEA SAEIARTAAR
501: SWLAPLLDTA CDRLAFVLGS LFEIALERNL NQNSEYEKKT ENMDGYVGFH AAVRNCYSRF VKNLAKQCKQ LVRHHLDSVT SPYSMACYEN NYHQGGAFGA
601: YNKFNQASPN SFCFELSDTS RDEPMKDQEN IPPEKNNGQE TTPGKGGESH ITVPETPSPD QPCEIVYGLV KKEIGNGPDG VGARKRMARM VGNRNIEPFR
701: VQNGGLMFAN ADNGMKSSSA YSEICSSAAQ HFARIREVLV ERSVTSTLNS GFLTPCRDRL VVALGLDLFA VNDDKFMDMF VAPGAIVVLQ NERQQLQKRQ
801: KILQSCLTEF KTVARSL

Arabidopsis Description

DRP5ADRP5A [Source:UniProtKB/TrEMBL;Acc:A0A178WBH9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.