CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	95.03	94.43
Os09t0572900-01	Rice	cytosol, plasma membrane	88.46	88.18
PGSC0003DMT400004319	Potato	cytosol	77.08	78.34
Solyc01g088510.2.1	Tomato	nucleus	64.1	78.12
GSMUA_AchrUn_...	Banana	cytosol	78.37	77.74
VIT_15s0021g00480.t01	Wine grape	cytosol	76.76	77.38
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	75.96	76.95
KRH66384	Soybean	cytosol, endoplasmic reticulum	75.48	76.21
KRH48908	Soybean	cytosol, nucleus	75.48	76.21
KXG37727	Sorghum	cytosol, mitochondrion	74.52	75.98
KXG38886	Sorghum	cytosol	76.44	75.71
PGSC0003DMT400028286	Potato	cytosol	73.72	75.16
AT3G60190.1	Thale cress	cytosol	75.16	75.16
Solyc10g062160.1.1	Tomato	plastid	69.87	74.53
CDY41188	Canola	cytosol	74.36	74.24
Bra007513.1-P	Field mustard	cytosol	74.2	74.08
CDX71832	Canola	cytosol	74.2	74.08
Bra014507.1-P	Field mustard	cytosol	74.2	73.96
CDX89053	Canola	cytosol	74.2	73.96
CDY42672	Canola	cytosol	73.88	73.76
CDY23444	Canola	cytosol	69.39	70.06
CDY30477	Canola	cytosol	69.23	69.9
AT2G44590.3	Thale cress	cytosol	68.43	69.77
PGSC0003DMT400004228	Potato	cytosol	31.57	69.61
Bra037643.1-P	Field mustard	cytosol	68.91	69.58
EES19921	Sorghum	cytosol	65.06	66.67
EES01270	Sorghum	cytosol	63.3	64.86
OQU81360	Sorghum	cytosol	32.05	26.45
EES04116	Sorghum	cytosol	34.29	26.13
KXG39737	Sorghum	cytosol	24.04	22.94
EER95148	Sorghum	cytosol	24.84	22.9
KXG25176	Sorghum	cytosol	23.88	19.81
EER88160	Sorghum	cytosol, endoplasmic reticulum, nucleus	28.37	19.39
EES05560	Sorghum	nucleus	28.37	19.22
EES03602	Sorghum	plastid	20.19	15.27
EES16755	Sorghum	cytosol	18.11	14.93

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	EntrezGene:8062585	UniProt:C5X6P9	InterPro:Dynamin_GTPase
InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	EnsemblPlants:EER98546	ProteinID:EER98546	ProteinID:EER98546.1
InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF73	SMART:SM00053	SMART:SM00302	EnsemblPlantsGene:SORBI_3002G140600	SUPFAM:SSF52540
UniParc:UPI0001A841F8	RefSeq:XP_002462025.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:22484413..22489881

Molecular Weight (calculated)

69285.9 Da

IEP (calculated)

7.002

GRAVY (calculated)

-0.364

Length

624 amino acids

Sequence
(BLAST)

001: MASMEGLIGL MNRIQRACTA LGDHGGGSDL PTLWESLPTI AVVGGQSSGK SSVLESIVGT DFLPRGSGIV TRRPLVLQLQ QTDNGSQEYA EFLHKPKTRF
101: SDFALVRQEI ADETDRLTGK TKQISPVPIH LSIYSPKVVN LTLIDLPGLT KVAVEGQSEN IVQDIENMVR SYVDKPNCII LAISPANQDI ATSDAIKLSK
201: EVDPTGERTF GVLTKLDLMD KGTNALDVLE GRAYRLQNPW VGIVNRSQAD INRKVGMLSA REKEREYFET SPDYAHLASR MGSEYLAKLL SQHLESVIKA
301: RIPSITATIN KTIDELESEL DIIGRGVASD PGAQLYTILD LCRAFDRVFK EHLDGGRSGG DRIYGVFDHK LPAAFKKLPF DRYLSVQNVK KVVSEADGYQ
401: PHLIAPEQGY RRLIEKGITY FRGPAEATVD AVHVVLKDLV RKSIGETEQL RRFPTLQAAI ATAANEALER FREDGRSTAL RLVDMEAAYV TVEFFRKLPQ
501: DPADPSSKVG PNKPPVEPSP TPDRYGDGHF RNIASNVSQY IRMVGDELLQ KIPKAAVHCQ VREAKRSLLN HFYVQIGKKE GGEFGHMLDE DPAMMERRQQ
601: CLKRLELYKS ARDEVDSVAW SSSR

Best Arabidopsis Sequence Match ( AT3G60190.1 )
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR

Arabidopsis Description

DRP1EDynamin-related protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.