Factsheet for PGSC0003DMT400004228

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030005_P002	Maize	cytosol, mitochondrion	74.2	52.24
Solyc01g088510.2.1	Tomato	nucleus	90.46	50.0
PGSC0003DMT400004319	Potato	cytosol	91.17	42.02
VIT_15s0021g00480.t01	Wine grape	cytosol	81.63	37.32
PGSC0003DMT400028286	Potato	cytosol	79.86	36.93
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	78.09	35.88
KRH48908	Soybean	cytosol, nucleus	78.09	35.76
GSMUA_Achr11P...	Banana	cytosol	77.39	35.67
GSMUA_Achr2P18210_001	Banana	cytosol	76.33	35.35
KRH66384	Soybean	cytosol, endoplasmic reticulum	76.33	34.95
GSMUA_AchrUn_...	Banana	cytosol	77.39	34.82
Os10t0567800-01	Rice	plasma membrane	74.91	34.3
AT3G60190.1	Thale cress	cytosol	75.62	34.29
CDX89053	Canola	cytosol	75.27	34.03
Bra014507.1-P	Field mustard	cytosol	75.27	34.03
PGSC0003DMT400004655	Potato	cytosol	73.14	33.93
CDY42672	Canola	cytosol	74.91	33.92
CDY41188	Canola	cytosol	74.56	33.76
Bra007513.1-P	Field mustard	cytosol	74.56	33.76
CDX71832	Canola	cytosol	74.56	33.76
KXG38886	Sorghum	cytosol	74.56	33.49
TraesCS1D01G216700.2	Wheat	cytosol	72.79	32.96
TraesCS1B01G227700.1	Wheat	cytosol	72.44	32.8
TraesCS1A01G213900.2	Wheat	cytosol	72.44	32.8
EER98546	Sorghum	cytosol	69.61	31.57
Os09t0572900-01	Rice	cytosol, plasma membrane	68.9	31.15
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	68.9	31.05
AT2G44590.3	Thale cress	cytosol	66.78	30.88
HORVU1Hr1G054560.1	Barley	mitochondrion	72.08	29.65
CDY30477	Canola	cytosol	63.96	29.29
CDY23444	Canola	cytosol	63.96	29.29
Bra037643.1-P	Field mustard	cytosol	63.6	29.13
PGSC0003DMT400000646	Potato	cytosol	61.84	28.69
PGSC0003DMT400051417	Potato	cytosol	51.94	26.58
PGSC0003DMT400064491	Potato	cytosol	16.61	11.87
PGSC0003DMT400094747	Potato	cytosol	12.37	8.47
PGSC0003DMT400095128	Potato	cytosol	13.07	8.43
PGSC0003DMT400064541	Potato	cytosol	16.61	7.68
PGSC0003DMT400072601	Potato	cytosol	16.25	7.43
PGSC0003DMT400064542	Potato	cytosol	16.96	7.11
PGSC0003DMT400014025	Potato	cytosol	15.9	5.84
PGSC0003DMT400050652	Potato	cytosol	12.37	5.69
PGSC0003DMT400032399	Potato	plastid	12.72	4.36
PGSC0003DMT400088564	Potato	cytosol	0.0	0.0
PGSC0003DMT400065607	Potato	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.120.1240	MapMan:35.1	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:IPR020850	UniProt:M0ZN34	PFAM:PF01031	PFAM:PF02212	EnsemblPlantsGene:PGSC0003DMG400001682
PGSC:PGSC0003DMG400001682	EnsemblPlants:PGSC0003DMT400004228	PFscan:PS51388	PANTHER:PTHR11566	PANTHER:PTHR11566:SF77	SMART:SM00302
UniParc:UPI000295A06D	SEG:seg	:	:	:	:

Description

Dynamin [Source:PGSC_GENE;Acc:PGSC0003DMG400001682]

Coordinates

chr1:+:68312971..68314669

Molecular Weight (calculated)

31872.3 Da

IEP (calculated)

6.376

GRAVY (calculated)

-0.289

Length

283 amino acids

Sequence
(BLAST)

001: MGSEYLAELL SKHLEQFIKA RIPSITSLIN KSIDELESEL DHLGRPIAVD AGAQLYTILE LCRAFDKIFK EHLDGGRPGG DRIYGVFDNQ LPAALRKLPF
101: DRYLSVQNVR NVVSEADGYQ PHLIAPEQGY RRLIEGALNY FRGPAEASVD AVSKGGKPEA SAAVDRYGEG HFRRIGSNVS SYVNMVSDTL RNTLPKAVVY
201: CQVKEAKQSL LNYFYTQIGK KEGKALSELL DEDPALMERR MQCAKRLELY KKARDEIDSV AWAAAPFLYL YLLLLMDLDK EMM

Best Arabidopsis Sequence Match ( AT1G14830.1 )
(BLAST)

001: MATMKSLIGL INKIQRACTV LGDHGGEGMS LWEALPTVAV VGGQSSGKSS VLESVVGRDF LPRGSGIVTR RPLVLQLHKT EDGTTEYAEF LHAPKKRFAD
101: FAAVRKEIED ETDRITGKSK QISNIPIQLS IYSPNVVNLT LIDLPGLTKV AVDGQPESIV QDIENMVRSY VEKPNCIILA ISPANQDIAT SDAIKLAREV
201: DPTGERTFGV ATKLDIMDKG TDCLDVLEGR SYRLQHPWVG IVNRSQADIN KRVDMIAARR KEQEYFETSP EYGHLASRMG SEYLAKLLSQ HLETVIRQKI
301: PSIVALINKS IDEINAELDR IGRPIAVDSG AQLYTILELC RAFDRVFKEH LDGGRPGGDR IYGVFDHQLP AALKKLPFDR HLSTKNVQKV VSEADGYQPH
401: LIAPEQGYRR LIDGSISYFK GPAEATVDAV HFVLKELVRK SISETEELKR FPTLASDIAA AANEALERFR DESRKTVLRL VDMESSYLTV EFFRKLHLEP
501: EKEKPNPRNA PAPNADPYSD NHFRKIGSNV SAYINMVCDT LRNSLPKAVV YCQVREAKRS LLNFFYAQVG RKEKEKLGAM LDEDPQLMER RGTLAKRLEL
601: YKQARDDIDA VAWK

Arabidopsis Description

DRP1CDRP1C [Source:UniProtKB/TrEMBL;Acc:A0A178W4V6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.