Factsheet for VIT_15s0021g00480.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46533	Soybean	cytosol, endoplasmic reticulum, nucleus	88.85	89.29
GSMUA_Achr2P18210_001	Banana	cytosol	87.88	89.03
VIT_02s0012g00740.t01	Wine grape	cytosol	88.05	88.91
PGSC0003DMT400004319	Potato	cytosol	87.88	88.6
GSMUA_Achr11P...	Banana	cytosol	87.88	88.6
Solyc01g088510.2.1	Tomato	nucleus	72.86	88.09
KRH48908	Soybean	cytosol, nucleus	87.24	87.38
KRH66384	Soybean	cytosol, endoplasmic reticulum	86.43	86.57
PGSC0003DMT400028286	Potato	cytosol	84.65	85.62
Os10t0567800-01	Rice	plasma membrane	84.49	84.63
AT3G60190.1	Thale cress	cytosol	84.98	84.29
Solyc10g062160.1.1	Tomato	plastid	79.48	84.1
CDY41188	Canola	cytosol	84.81	84.0
CDX71832	Canola	cytosol	84.81	84.0
Bra007513.1-P	Field mustard	cytosol	84.65	83.84
CDX89053	Canola	cytosol	84.65	83.71
Bra014507.1-P	Field mustard	cytosol	84.65	83.71
CDY42672	Canola	cytosol	84.49	83.68
GSMUA_AchrUn_...	Banana	cytosol	84.98	83.62
KXG38886	Sorghum	cytosol	84.33	82.86
VIT_01s0011g05800.t01	Wine grape	cytosol	81.1	81.89
PGSC0003DMT400004228	Potato	cytosol	37.32	81.63
TraesCS1A01G213900.2	Wheat	cytosol	81.91	81.12
Zm00001d030005_P002	Maize	cytosol, mitochondrion	52.5	80.85
TraesCS1B01G227700.1	Wheat	cytosol	81.58	80.8
TraesCS1D01G216700.2	Wheat	cytosol	81.58	80.8
CDY23444	Canola	cytosol	78.19	78.32
CDY30477	Canola	cytosol	78.19	78.32
Bra037643.1-P	Field mustard	cytosol	77.87	77.99
AT2G44590.3	Thale cress	cytosol	76.58	77.45
Os09t0572900-01	Rice	cytosol, plasma membrane	78.03	77.16
EER98546	Sorghum	cytosol	77.38	76.76
Zm00001d005306_P002	Maize	cytosol, extracellular, mitochondrion	76.9	75.8
HORVU1Hr1G054560.1	Barley	mitochondrion	81.42	73.26
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	69.95	71.1
VIT_15s0046g00470.t01	Wine grape	cytosol	69.14	69.71
VIT_04s0008g07010.t01	Wine grape	cytosol	28.76	27.47
VIT_03s0038g00970.t01	Wine grape	cytosol	36.03	26.71
VIT_15s0107g00170.t01	Wine grape	cytosol	9.69	25.53
VIT_00s0267g00020.t01	Wine grape	cytosol	6.3	24.84
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	9.85	23.02
VIT_18s0089g00350.t01	Wine grape	cytosol	29.89	19.87
VIT_12s0035g01740.t01	Wine grape	cytosol	28.27	19.02
VIT_12s0055g00490.t01	Wine grape	cytosol	19.55	15.65
VIT_19s0014g02500.t01	Wine grape	plastid	20.19	14.92
VIT_03s0110g00120.t01	Wine grape	cytosol	4.2	10.53
VIT_02s0087g00010.t01	Wine grape	cytosol	2.91	9.68
VIT_03s0038g00540.t01	Wine grape	cytosol	2.58	9.09

Protein Annotations

Gene3D:1.20.120.1240	EntrezGene:100266825	wikigene:100266825	MapMan:22.1.7.1	Gene3D:3.40.50.300	EMBL:AM487731
ProteinID:CAN71045	ProteinID:CAN71045.1	ProteinID:CBI16731	ProteinID:CBI16731.3	UniProt:D7SM53	InterPro:Dynamin_GTPase
InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	EMBL:FN594952	InterPro:GED	InterPro:GED_dom
GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:G_DYNAMIN_dom
InterPro:IPR020850	InterPro:IPR030381	EntrezGene:LOC100266825	wikigene:LOC100266825	InterPro:P-loop_NTPase	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388	PFscan:PS51718
PANTHER:PTHR11566	PANTHER:PTHR11566:SF77	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	TIGR:TC52249
UniParc:UPI0001984C1A	ArrayExpress:VIT_15s0021g00480	EnsemblPlantsGene:VIT_15s0021g00480	EnsemblPlants:VIT_15s0021g00480.t01	unigene:Vvi.2182	RefSeq:XP_002265511
RefSeq:XP_002265511.1	RefSeq:XP_002265553	RefSeq:XP_002265553.2	RefSeq:XP_003633899	RefSeq:XP_003633899.1	SEG:seg

Description

No Description!

Coordinates

chr15:-:10039741..10047919

Molecular Weight (calculated)

69280.1 Da

IEP (calculated)

7.403

GRAVY (calculated)

-0.332

Length

619 amino acids

Sequence
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDYGGGDNT FSSLWEALPS VAVVGGQSSG KSSVLESIVG RDFLPRGSGI VTRRPLVLQL HKTESGQQEY AEFLHLPKRR
101: FTDFALVRKE IQDETDRITG RTKQISNVPI HLSIYSPNVV NLTLIDLPGL TKVAVEGQPE TIVEDIENMV RSYVEKPNSI ILAISPANQD IATSDAIKLA
201: REVDPSGERT FGVLTKLDLM DKGTNALEVL EGRSYRLQHP WVGIVNRSQA DINKNVDMIV ARRKEREYFA TSPDYGHLAS KMGSEYLAKL LSKHLETVIR
301: ARIPSITSLI NKSIDELESE MDHLGRPIAV DAGAQLYTIL ELCRAFDCIF KEHLDGGRPG GDRIYGVFDN QLPAALRKLP FDRHLSLQNV RKIVSEADGY
401: QPHLIAPEQG YRRLIEGSLN YFRGPAEASV DAVHFVLKEL VRKSIGETQE LKRFPTLQAE ISAATGESLE RFRDDSKKTV IRLVEMEASY LTVEFFRKLP
501: QEVEKVGNPA GGNPAASTVD RYTEGHFRRI ASNVSSYVNM VSDTLRNTIP KAVVHCQVRE AKQSLLNLFY TQIGKKEGKQ LSQMLDEDPA LMERRQQCAK
601: RLELYKAARD EIDSVSWVR

Best Arabidopsis Sequence Match ( AT3G60190.1 )
(BLAST)

001: MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR

Arabidopsis Description

DRP1EDynamin-related protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.