Factsheet for VIT_04s0008g07010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g006600.2.1	Tomato	plastid	62.19	53.38
VIT_03s0038g00970.t01	Wine grape	cytosol	62.19	48.26
VIT_02s0012g00740.t01	Wine grape	cytosol	27.78	29.36
VIT_01s0011g05800.t01	Wine grape	cytosol	27.31	28.87
VIT_15s0021g00480.t01	Wine grape	cytosol	27.47	28.76
VIT_15s0046g00470.t01	Wine grape	cytosol	26.39	27.85
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	25.93	27.59
VIT_15s0107g00170.t01	Wine grape	cytosol	6.02	16.6
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	5.86	14.34
VIT_18s0089g00350.t01	Wine grape	cytosol	19.6	13.64
VIT_12s0055g00490.t01	Wine grape	cytosol	16.2	13.58
VIT_12s0035g01740.t01	Wine grape	cytosol	18.67	13.15
VIT_00s0267g00020.t01	Wine grape	cytosol	3.09	12.74
VIT_19s0014g02500.t01	Wine grape	plastid	15.12	11.69
VIT_03s0110g00120.t01	Wine grape	cytosol	3.86	10.12
VIT_02s0087g00010.t01	Wine grape	cytosol	2.78	9.68
VIT_03s0038g00540.t01	Wine grape	cytosol	2.62	9.66

Protein Annotations

Gene3D:1.20.120.1240	MapMan:13.6.2.1	Gene3D:3.40.50.300	ProteinID:CCB46887	ProteinID:CCB46887.1	InterPro:Dynamin_GTPase
InterPro:Dynamin_SF	InterPro:Dynamin_central	UniProt:F6H3K1	EMBL:FN595231	InterPro:GED	InterPro:GED_dom
GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF01031
PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF84
SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI0002109A8C	ArrayExpress:VIT_04s0008g07010	EnsemblPlantsGene:VIT_04s0008g07010
EnsemblPlants:VIT_04s0008g07010.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:+:7027372..7101962

Molecular Weight (calculated)

73258.4 Da

IEP (calculated)

6.823

GRAVY (calculated)

-0.306

Length

648 amino acids

Sequence
(BLAST)

001: MLMLQNRPPR GDSDDAREWG EFRHLPGKRF YDFSKIRQEI QDETERGAGF NKGVSEKQIR LMISSPNVLN MTLIDLPGIT KVPVGDQPTD IEARVKKMIM
101: SHIKQENCII LAVTPANSDL ANSDALQMAR DADPAGTRTI GVITKLDIMD RGTNACNFLL GNIVPLSLGY VGVVNRSQED LNQNRSISEA LAYEDQFFHD
201: HPVYHGLSDC CGVPQLAKKL NQILEHHIRM VLPSLKDELN CHMIAVVKEL QTSGEVVESK VEQGAVLLSI LKKYCEAFSA LVDGKSQEMS TRELSGGARI
301: HYIFQSIFVK SLEEVDPCEA LTDEDIRMAI QNANGPRNAL FVPEVPFQIL VRRQIHRLLD PSLQCLRYVH AELLKMSHAC EAPEVQRFPV LRRKLEDVMG
401: KFLRDGIKPA ERMIGNMIEM EKGYINSSHP NFIGGSKAVE LAVQQLRSSQ VYSTIYSQTV ACNFTGNAYS RTWGISSIIG KWASPNDRSA NTALGETFHD
501: MELLPSMIQL RDPPPILKPL ETQTEREAVE VIVTKLLLRS YYDIVRKNVQ DFVPKAIMHF LVNHTKRDLL NAFVQKLYRE NLFKEMLREQ DDVILKRKRS
601: QEMFCVLQQA IQAIDEVDSE MSSPNSNSSF SADTTMRLPR TPSHHSHV

Best Arabidopsis Sequence Match ( AT4G33650.1 )
(BLAST)

001: MTIEEVSGET PPSTPPSSST PSPSSSTTNA APLGSSVIPI VNKLQDIFAQ LGSQSTIALP QVVVVGSQSS GKSSVLEALV GRDFLPRGND ICTRRPLVLQ
101: LLQTKSRANG GSDDEWGEFR HLPETRFYDF SEIRREIEAE TNRLVGENKG VADTQIRLKI SSPNVLNITL VDLPGITKVP VGDQPSDIEA RIRTMILSYI
201: KQDTCLILAV TPANTDLANS DALQIASIVD PDGHRTIGVI TKLDIMDKGT DARKLLLGNV VPLRLGYVGV VNRCQEDILL NRTVKEALLA EEKFFRSHPV
301: YHGLADRLGV PQLAKKLNQI LVQHIKVLLP DLKSRISNAL VATAKEHQSY GELTESRAGQ GALLLNFLSK YCEAYSSLLE GKSEEMSTSE LSGGARIHYI
401: FQSIFVKSLE EVDPCEDLTD DDIRTAIQNA TGPRSALFVP DVPFEVLVRR QISRLLDPSL QCARFIFEEL IKISHRCMMN ELQRFPVLRK RMDEVIGDFL
501: REGLEPSEAM IGDIIDMEMD YINTSHPNFI GGTKAVEAAM HQVKSSRIPH PVARPKDTVE PDRTSSSTSQ VKSRSFLGRQ ANGIVTDQGV VSADAEKAQP
601: AANASDTRWG IPSIFRGGDT RAVTKDSLLN KPFSEAVEDM SHNLSMIYLK EPPAVLRPTE THSEQEAVEI QITKLLLRSY YDIVRKNIED SVPKAIMHFL
701: VNHTKRELHN VFIKKLYREN LFEEMLQEPD EIAVKRKRTQ ETLHVLQQAY RTLDELPLEA DSVSAGMSKH QELLTSSKYS TSSSYSASPS TTRRSRRAGD
801: QHQNGYGF

Arabidopsis Description

DRP3ANOXY15 [Source:UniProtKB/TrEMBL;Acc:A0A178UUQ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.