Factsheet for VIT_03s0110g00120.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
cytosol 2
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0087g00010.t01	Wine grape	cytosol	70.45	93.55
VIT_03s0038g00540.t01	Wine grape	cytosol	59.11	82.95
Solyc01g103120.2.1	Tomato	cytosol	60.73	50.85
VIT_12s0035g01740.t01	Wine grape	cytosol	84.62	22.72
VIT_18s0089g00350.t01	Wine grape	cytosol	75.3	19.98
GSMUA_Achr1P18350_001	Banana	cytosol	69.64	19.24
Solyc11g039650.1.1	Tomato	cytosol, nucleus, plastid	71.26	19.15
GSMUA_Achr4P20040_001	Banana	cytosol	70.45	18.93
GSMUA_Achr3P01090_001	Banana	nucleus	69.64	18.74
GSMUA_Achr7P05530_001	Banana	nucleus	69.23	18.57
KRH01870	Soybean	endoplasmic reticulum	68.02	18.38
KRH51295	Soybean	endoplasmic reticulum	67.21	18.16
VIT_15s0046g00470.t01	Wine grape	cytosol	12.15	4.89
VIT_02s0012g00740.t01	Wine grape	cytosol	11.74	4.73
VIT_02s0025g01570.t01	Wine grape	cytosol, extracellular	10.93	4.43
VIT_01s0011g05800.t01	Wine grape	cytosol	10.53	4.24
VIT_15s0021g00480.t01	Wine grape	cytosol	10.53	4.2
VIT_04s0008g07010.t01	Wine grape	cytosol	10.12	3.86
VIT_19s0015g02240.t01	Wine grape	golgi, mitochondrion, plasma membrane	4.05	3.77
VIT_03s0038g00970.t01	Wine grape	cytosol	12.15	3.59
VIT_15s0107g00170.t01	Wine grape	cytosol	3.24	3.4
VIT_12s0055g00490.t01	Wine grape	cytosol	8.5	2.72
VIT_00s0267g00020.t01	Wine grape	cytosol	1.21	1.91
VIT_19s0014g02500.t01	Wine grape	plastid	6.07	1.79
Solyc01g103130.1.1	Tomato	nucleus, unclear	3.24	1.32

Protein Annotations

Gene3D:1.20.120.1240	MapMan:35.1	ProteinID:CBI32931	ProteinID:CBI32931.3	ncoils:Coil	UniProt:D7TR08
InterPro:Dynamin_SF	EMBL:FN596010	InterPro:GED	InterPro:GED_dom	GO:GO:0000166	GO:GO:0000266
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:IPR001849	InterPro:IPR020850	PFAM:PF02212
InterPro:PH_domain	PFscan:PS50003	PFscan:PS51388	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57	SignalP:SignalP-noTM
UniParc:UPI0001BE3AFC	ArrayExpress:VIT_03s0110g00120	EnsemblPlantsGene:VIT_03s0110g00120	EnsemblPlants:VIT_03s0110g00120.t01	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:12864198..12866540

Molecular Weight (calculated)

27435.9 Da

IEP (calculated)

9.166

GRAVY (calculated)

-0.444

Length

247 amino acids

Sequence
(BLAST)

001: MVNLCFSHLV LLKCYDMASP YCMCHLEYNI EEIANEDEPP PKSSKSKKEN GPEKSPNLVF KITSKVPYKT VLKAHSAVVL KAESAADKAE WLNKLRNVIQ
101: PSGQVKGESG LTMRQSLSDG SLDTMARRPT DPEEQLRWMS QAVRGYVQAV LNSLAANVPK FVVLCQVEKS KEDMLNQLYS SVSAQSTARI EELLQEDQNV
201: KRRRERNQKQ SSLLAKLTKQ LSIHDNRAAA ASSSWSNGGA GIIVVTV

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.