Factsheet for Solyc01g103120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g00540.t01	Wine grape	cytosol	36.61	61.36
VIT_02s0087g00010.t01	Wine grape	cytosol	38.64	61.29
VIT_03s0110g00120.t01	Wine grape	cytosol	50.85	60.73
Solyc11g039650.1.1	Tomato	cytosol, nucleus, plastid	70.17	22.52
VIT_12s0035g01740.t01	Wine grape	cytosol	69.49	22.28
GSMUA_Achr4P20040_001	Banana	cytosol	68.81	22.09
GSMUA_Achr7P05530_001	Banana	nucleus	68.47	21.93
KRH01870	Soybean	endoplasmic reticulum	67.8	21.88
KRH51295	Soybean	endoplasmic reticulum	67.46	21.77
GSMUA_Achr1P18350_001	Banana	cytosol	64.41	21.25
GSMUA_Achr3P01090_001	Banana	nucleus	63.39	20.37
Solyc11g043210.1.1	Tomato	nucleus	13.9	7.44
Solyc01g088510.2.1	Tomato	nucleus	10.51	6.05
Solyc08g077360.2.1	Tomato	plastid	10.85	5.25
Solyc01g095970.2.1	Tomato	plastid	10.17	4.92
Solyc01g005310.2.1	Tomato	plastid	10.17	4.82
Solyc01g106050.2.1	Tomato	plastid	12.88	4.62
Solyc05g050600.2.1	Tomato	nucleus, plastid	9.15	4.43
Solyc08g006600.2.1	Tomato	plastid	9.15	3.58
Solyc10g062160.1.1	Tomato	plastid	6.78	3.42
Solyc11g070010.1.1	Tomato	cytosol	3.39	2.54
Solyc10g047050.1.1	Tomato	nucleus	6.44	2.46
Solyc04g072030.1.1	Tomato	cytosol	5.42	2.37
Solyc11g069980.1.1	Tomato	cytosol	5.76	2.13
Solyc07g063080.2.1	Tomato	plastid	5.76	2.05
Solyc01g103130.1.1	Tomato	nucleus, unclear	2.03	0.99
Solyc11g043200.1.1	Tomato	cytosol, nucleus	0.68	0.87
Solyc11g043170.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:2.30.29.30	MapMan:35.1	InterPro:Dynamin_SF	InterPro:GED	InterPro:GED_dom
GO:GO:0000166	GO:GO:0000266	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	InterPro:IPR001849
InterPro:IPR011993	InterPro:IPR020850	UniProt:K4B1N8	PFAM:PF02212	InterPro:PH-like_dom_sf	InterPro:PH_domain
PFscan:PS50003	PFscan:PS51388	PANTHER:PTHR11566	PANTHER:PTHR11566:SF57	SUPFAM:SSF50729	EnsemblPlantsGene:Solyc01g103120.2
EnsemblPlants:Solyc01g103120.2.1	UniParc:UPI0002768216	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:-:91781477..91785267

Molecular Weight (calculated)

32384.0 Da

IEP (calculated)

9.011

GRAVY (calculated)

-0.788

Length

295 amino acids

Sequence
(BLAST)

001: MLLQLGYTKK QEERHFHGVI TLEECNLEDA SEEDEPSKSS KDKKATWPDG GKGPSLLFKL TNRVQYKTIL KAQSTVILKA ETLAEKTEWL NKLKNVISSK
101: GGQVIAESSQ PMRPSLSEGT PGTPDMMTRK PADPEEELRW MAQEVRGYVE AVLNSLAANV PKAVVLCQVE KAREDMLNKL YSSVSAQSRA KIEELLLEDH
201: NVKRRREHFQ KQSSLLAKVT QQLSVHDNRA AAASSYSNSD GAESVSRSGG QSSGDEWRSA FDGTSSAPQN GDAGSRSRRT PSRMPPAPPG SGQKS

Best Arabidopsis Sequence Match ( AT1G10290.1 )
(BLAST)

001: MEAIDELSQL SDSMKQAASL LADEDPDETS SSKRPATFLN VVALGNVGAG KSAVLNSLIG HPVLPTGENG ATRAPIIIEL SRESSLSSKA IILQIDNKSQ
101: QVSASALRHS LQDRLSKGAS GKNRDEINLK LRTSTAPPLK LVDLPGLDQR IVDESMIAEY AQHNDAILLV IVPASQASEI SSSRALKIAK EYDPESTRTI
201: GIIGKIDQAA ENSKALAAVQ ALLSNQGPPK TTDIPWVAVI GQSVSIASAQ SGSGENSLET AWRAESESLK SILTGAPQSK LGRIALVDTL ASQIRSRMKL
301: RLPSVLSGLQ GKSQIVQDEL ARLGEQLVNS AEGTRAIALE LCREFEDKFL LHLAGGEGSG WKVVASFEGN FPNRIKQLPL DRHFDLNNVK RVVLEADGYQ
401: PYLISPEKGL RSLIKIVLEL AKDPARLCVD EVHRVLVDIV SASANATPGL GRYPPFKREV VAIASAALDG FKNEAKKMVV ALVDMERAFV PPQHFIRLVQ
501: RRMERQRREE ELKGRSSKKG QDAEQSLLSR ATSPQPDGPT AGGSLKSMKD KPSPQDKETP EVSGLKTAGP EGEITAGYLM KKSAKTNGWS RRWFVLNEKT
601: GKLGYTKKQE ERNFRGTITL EECTIEEIPE DEVEKSKSSK DKKANGPDSK GPGLVFKITC KVPYKTVLKA HNALVLKAES VVDKNEWINK LQKVIQARGG
701: QVGSVSMRQS LSEGSLDKMV RKPIDPEEEL RWMSQEVRGY VEAVLNSLAA NVPKAVVLCQ VEKAKEDMLN QLYSSISAIG NERIESLIQE DQNVKRRRER
801: YQKQSSLLSK LTRQLSIHDN RAAAASSYSD NSGTESSPRA SGGSSGDDWM NAFNSAANGP SDSLSKYGSG GHSRRYSDPA QNGDAASPGS GSNRRTTPNR
901: LPPAPPPTGS AYRY

Arabidopsis Description

DRP2ADRP2A [Source:UniProtKB/TrEMBL;Acc:A0A178WBB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.