Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g072030.1.1 | Tomato | cytosol | 41.73 | 24.3 |
| Solyc11g069980.1.1 | Tomato | cytosol | 43.26 | 21.28 |
| Solyc01g088510.2.1 | Tomato | nucleus | 10.94 | 8.4 |
| Solyc11g043210.1.1 | Tomato | nucleus | 11.7 | 8.35 |
| Solyc05g050600.2.1 | Tomato | nucleus, plastid | 12.47 | 8.05 |
| Solyc01g095970.2.1 | Tomato | plastid | 11.96 | 7.7 |
| Solyc08g077360.2.1 | Tomato | plastid | 11.96 | 7.7 |
| Solyc01g005310.2.1 | Tomato | plastid | 10.94 | 6.91 |
| Solyc01g106050.2.1 | Tomato | plastid | 13.99 | 6.69 |
| Solyc10g047050.1.1 | Tomato | nucleus | 11.96 | 6.1 |
| Solyc10g062160.1.1 | Tomato | plastid | 8.91 | 5.98 |
| Solyc08g006600.2.1 | Tomato | plastid | 10.43 | 5.43 |
| Solyc01g103130.1.1 | Tomato | nucleus, unclear | 6.87 | 4.45 |
| Solyc11g039650.1.1 | Tomato | cytosol, nucleus, plastid | 9.92 | 4.24 |
| Solyc07g063080.2.1 | Tomato | plastid | 8.65 | 4.1 |
| Solyc11g043200.1.1 | Tomato | cytosol, nucleus | 2.04 | 3.49 |
| Solyc01g103120.2.1 | Tomato | cytosol | 2.54 | 3.39 |
| Solyc11g043170.1.1 | Tomato | cytosol | 0.76 | 1.84 |
Protein Annotations
| EnsemblPlants:Solyc11g070010.1.1 | EnsemblPlantsGene:Solyc11g070010.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| InterPro:Dynamin_SF | InterPro:Dynamin_central | PANTHER:PTHR11566 | PANTHER:PTHR11566:SF135 | PFAM:PF01031 | SEG:seg |
| UniParc:UPI0002769548 | UniProt:K4DAF7 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr11:+:54583805..54585238
Molecular Weight (calculated)
45122.7 Da
IEP (calculated)
6.329
GRAVY (calculated)
-0.133
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYSYLITLD VDGVLNNFLM NNEISIFWDK KPLSPHAILF IPVLAHKLVQ IQANIISKCF LDIEKNINDK LAVNVAALNE LPQHSGSVAE ALATFMRIQS
101: LAIESLKKIF LGVESNEYIG DFEKQCAEKW SKLIDLEFKQ FSAELSSTYP DEKVDNLFME FMFLDEAQKT GSPDFLDVLQ KKFPGIQHFI KRAVQNFIAR
201: RKDKSVNGIR EILGMDRLTD ITSSTDYVAT YRSLIAQKRK FVKYCQYSKG SKINIDGFGV IDVWFIRRQP KDLVQQAFEL KMTMAAYWKT VFSPQKLDDH
301: EIEMEIVNDR MATSHVRFFA YWKFTLGLEK FVDEINDEVV GDLIASHGGG HESSLQESLS AEMCFRLKKS VKLLEELKEM VVKIMEYSLG SSC
101: LAIESLKKIF LGVESNEYIG DFEKQCAEKW SKLIDLEFKQ FSAELSSTYP DEKVDNLFME FMFLDEAQKT GSPDFLDVLQ KKFPGIQHFI KRAVQNFIAR
201: RKDKSVNGIR EILGMDRLTD ITSSTDYVAT YRSLIAQKRK FVKYCQYSKG SKINIDGFGV IDVWFIRRQP KDLVQQAFEL KMTMAAYWKT VFSPQKLDDH
301: EIEMEIVNDR MATSHVRFFA YWKFTLGLEK FVDEINDEVV GDLIASHGGG HESSLQESLS AEMCFRLKKS VKLLEELKEM VVKIMEYSLG SSC
001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
Arabidopsis Description
DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.