Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007513.1-P | Field mustard | cytosol | 98.88 | 98.88 |
| CDY41188 | Canola | cytosol | 98.72 | 98.72 |
| CDX89053 | Canola | cytosol | 96.64 | 96.49 |
| CDY42672 | Canola | cytosol | 96.32 | 96.32 |
| AT3G60190.1 | Thale cress | cytosol | 94.4 | 94.55 |
| VIT_15s0021g00480.t01 | Wine grape | cytosol | 84.0 | 84.81 |
| GSMUA_Achr2P18210_001 | Banana | cytosol | 82.24 | 84.12 |
| PGSC0003DMT400004319 | Potato | cytosol | 82.24 | 83.71 |
| KRH46533 | Soybean | cytosol, endoplasmic reticulum, nucleus | 82.24 | 83.44 |
| Solyc01g088510.2.1 | Tomato | nucleus | 68.0 | 83.01 |
| GSMUA_Achr11P... | Banana | cytosol | 81.12 | 82.57 |
| CDY23444 | Canola | cytosol | 80.0 | 80.91 |
| CDY30477 | Canola | cytosol | 79.84 | 80.74 |
| KRH48908 | Soybean | cytosol, nucleus | 79.68 | 80.58 |
| KRH66384 | Soybean | cytosol, endoplasmic reticulum | 79.36 | 80.26 |
| Os10t0567800-01 | Rice | plasma membrane | 78.88 | 79.77 |
| PGSC0003DMT400028286 | Potato | cytosol | 78.08 | 79.74 |
| GSMUA_AchrUn_... | Banana | cytosol | 79.2 | 78.7 |
| Solyc10g062160.1.1 | Tomato | plastid | 73.28 | 78.29 |
| KXG38886 | Sorghum | cytosol | 78.72 | 78.1 |
| TraesCS1B01G227700.1 | Wheat | cytosol | 77.44 | 77.44 |
| TraesCS1D01G216700.2 | Wheat | cytosol | 77.44 | 77.44 |
| TraesCS1A01G213900.2 | Wheat | cytosol | 77.28 | 77.28 |
| CDX84001 | Canola | cytosol | 75.84 | 77.2 |
| CDY52026 | Canola | cytosol | 75.84 | 77.2 |
| CDX81675 | Canola | cytosol | 75.68 | 77.04 |
| CDY33737 | Canola | cytosol | 75.68 | 77.04 |
| Zm00001d030005_P002 | Maize | cytosol, mitochondrion | 48.32 | 75.12 |
| PGSC0003DMT400004228 | Potato | cytosol | 33.76 | 74.56 |
| EER98546 | Sorghum | cytosol | 74.08 | 74.2 |
| Os09t0572900-01 | Rice | cytosol, plasma membrane | 73.44 | 73.32 |
| Zm00001d005306_P002 | Maize | cytosol, extracellular, mitochondrion | 73.44 | 73.09 |
| HORVU1Hr1G054560.1 | Barley | mitochondrion | 76.96 | 69.91 |
| CDX67529 | Canola | cytosol | 66.08 | 67.7 |
| CDX99702 | Canola | cytosol | 66.08 | 67.7 |
| CDY27661 | Canola | cytosol | 65.92 | 67.54 |
| CDY13364 | Canola | cytosol | 65.76 | 67.38 |
| CDY25074 | Canola | cytosol | 64.96 | 66.56 |
| CDX67862 | Canola | cytosol | 64.8 | 66.39 |
| CDY35022 | Canola | cytosol | 23.68 | 51.57 |
| CDY35023 | Canola | cytosol | 27.52 | 49.57 |
| CDX94910 | Canola | cytosol | 23.68 | 31.16 |
| CDY53048 | Canola | cytosol | 21.76 | 27.2 |
| CDY47217 | Canola | cytosol | 22.08 | 26.85 |
| CDY47216 | Canola | cytosol | 22.88 | 26.58 |
| CDY46101 | Canola | cytosol | 33.28 | 25.9 |
| CDY31035 | Canola | cytosol | 25.76 | 25.72 |
| CDX68994 | Canola | cytosol | 33.28 | 25.58 |
| CDY48440 | Canola | cytosol | 32.96 | 25.53 |
| CDY28314 | Canola | cytosol | 32.8 | 25.43 |
| CDY20643 | Canola | cytosol | 25.44 | 25.12 |
| CDY34120 | Canola | cytosol | 26.24 | 25.08 |
| CDY24536 | Canola | cytosol | 26.24 | 25.08 |
| CDX72418 | Canola | cytosol | 33.28 | 25.03 |
| CDX75370 | Canola | cytosol | 33.44 | 24.88 |
| CDY36456 | Canola | cytosol | 7.2 | 24.19 |
| CDY23281 | Canola | cytosol | 15.2 | 23.99 |
| CDY02039 | Canola | cytosol, plastid | 21.44 | 23.97 |
| CDY53046 | Canola | cytosol | 25.28 | 23.44 |
| CDY03289 | Canola | cytosol | 17.76 | 21.02 |
| CDY34117 | Canola | cytosol | 17.76 | 21.02 |
| CDX93442 | Canola | cytosol | 30.4 | 20.86 |
| CDY29721 | Canola | cytosol | 5.12 | 20.65 |
| CDY34897 | Canola | cytosol | 29.92 | 20.44 |
| CDY27283 | Canola | cytosol | 24.8 | 20.31 |
| CDY04455 | Canola | cytosol | 29.76 | 20.26 |
| CDY45889 | Canola | cytosol | 29.76 | 20.22 |
| CDY44550 | Canola | cytosol | 29.92 | 19.4 |
| CDX94909 | Canola | mitochondrion | 21.44 | 18.43 |
| CDY33414 | Canola | cytosol | 19.36 | 15.57 |
| CDY42203 | Canola | cytosol | 19.36 | 15.39 |
| CDY25877 | Canola | plastid | 19.04 | 14.46 |
| CDY53047 | Canola | cytosol | 1.92 | 12.37 |
| CDY24530 | Canola | cytosol, nucleus, plasma membrane | 12.0 | 11.83 |
| CDY50514 | Canola | plastid | 14.4 | 11.75 |
| CDY29720 | Canola | cytosol, extracellular | 4.8 | 7.01 |
Protein Annotations
| Gene3D:1.20.120.1240 | MapMan:22.1.7.1 | Gene3D:3.40.50.300 | GO:A0A078C4J1 | EnsemblPlants:CDX71832 | ProteinID:CDX71832 |
| ProteinID:CDX71832.1 | ncoils:Coil | InterPro:Dynamin_GTPase | InterPro:Dynamin_GTPase_CS | InterPro:Dynamin_SF | InterPro:Dynamin_central |
| InterPro:GED | InterPro:GED_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00155555001 | InterPro:G_DYNAMIN_dom | InterPro:IPR020850 |
| InterPro:IPR030381 | InterPro:P-loop_NTPase | PFAM:PF00350 | PFAM:PF01031 | PFAM:PF02212 | PRINTS:PR00195 |
| ScanProsite:PS00410 | PFscan:PS51388 | PFscan:PS51718 | PANTHER:PTHR11566 | PANTHER:PTHR11566:SF73 | SMART:SM00053 |
| SMART:SM00302 | SUPFAM:SSF52540 | UniParc:UPI0004EE6DB1 | SEG:seg | : | : |
Description
BnaC08g30420D
Coordinates
chrLK031795:+:765538..769428
Molecular Weight (calculated)
69833.2 Da
IEP (calculated)
7.872
GRAVY (calculated)
-0.274
Length
625 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTMESLIGL VNRIQRACTV LGDYGGGTGD NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTEEGTE EYAEFLHLPK
101: RKFIDFALVR KEIQDETDRI TGKSKQISPV PIHLSIFSPN VVNLTLIDLP GLTKVAVEGQ PETIVEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKEVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYKLQ HPWVGIVNRS QADINRNADM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRSRIPSILS LINKSIEELE RELDRLGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKRIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHFVLK ELVRKSIAET QELKRFPSLQ VELALAANTS LEKFREESKK SVIRLVEMES AYLTAEFFRK
501: LPQEMERPAV ANSKNQTASP SPATQELYGD GHFRRIASNV SAYVGMVSDT LRNTIPKACV YCQVRQAKLA LLNYFYSQIS KREGKQLGLL LDEDPALMGR
601: RLECAQRLEL YKKARDEIDA VAWVR
101: RKFIDFALVR KEIQDETDRI TGKSKQISPV PIHLSIFSPN VVNLTLIDLP GLTKVAVEGQ PETIVEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKEVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYKLQ HPWVGIVNRS QADINRNADM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRSRIPSILS LINKSIEELE RELDRLGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKRIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHFVLK ELVRKSIAET QELKRFPSLQ VELALAANTS LEKFREESKK SVIRLVEMES AYLTAEFFRK
501: LPQEMERPAV ANSKNQTASP SPATQELYGD GHFRRIASNV SAYVGMVSDT LRNTIPKACV YCQVRQAKLA LLNYFYSQIS KREGKQLGLL LDEDPALMGR
601: RLECAQRLEL YKKARDEIDA VAWVR
001: MTTMESLIGL VNRIQRACTV LGDYGGGTGS NAFNSLWEAL PTVAVVGGQS SGKSSVLESI VGRDFLPRGS GIVTRRPLVL QLHKTDDGTE EYAEFLHLPK
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR
101: KQFTDFALVR REIQDETDRI TGKNKQISPV PIHLSIYSPN VVNLTLIDLP GLTKVAVEGQ PETIAEDIES MVRTYVDKPN CIILAISPAN QDIATSDAIK
201: LAKDVDPTGE RTFGVLTKLD LMDKGTNALE VLEGRSYRLQ HPWVGIVNRS QADINKNVDM MLARRKEREY FDTSPDYGHL ASKMGSEYLA KLLSKHLESV
301: IRTRIPSILS LINKSIEELE RELDRMGRPV AVDAGAQLYT ILEMCRAFDK IFKEHLDGGR PGGDRIYGVF DNQLPAALKK LPFDRHLSLQ SVKKIVSEAD
401: GYQPHLIAPE QGYRRLIEGA LGYFRGPAEA SVDAVHYVLK ELVRKSISET EELKRFPSLQ VELAAAANSS LEKFREESKK SVIRLVDMES AYLTAEFFRK
501: LPQEIERPVT NSKNQTASPS SATLDQYGDG HFRRIASNVS AYVNMVSDTL RNTIPKACVY CQVRQAKLAL LNYFYSQISK REGKQLGQLL DEDPALMDRR
601: LECAKRLELY KKARDEIDAV AWVR
Arabidopsis Description
DRP1EDynamin-related protein 1E [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.