Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24536 | Canola | cytosol | 98.93 | 98.93 |
| CDY47217 | Canola | cytosol | 62.39 | 79.38 |
| CDY47216 | Canola | cytosol | 64.83 | 78.81 |
| CDY53048 | Canola | cytosol | 59.94 | 78.4 |
| CDY34117 | Canola | cytosol | 62.54 | 77.46 |
| CDY03289 | Canola | cytosol | 62.54 | 77.46 |
| CDY53046 | Canola | cytosol | 77.98 | 75.67 |
| CDY53047 | Canola | cytosol | 11.01 | 74.23 |
| CDY02039 | Canola | cytosol, plastid | 61.62 | 72.09 |
| CDY23281 | Canola | cytosol | 42.05 | 69.44 |
| CDY36456 | Canola | cytosol | 19.57 | 68.82 |
| PGSC0003DMT400088564 | Potato | cytosol | 11.62 | 61.79 |
| KRH11082 | Soybean | cytosol | 12.84 | 57.53 |
| Solyc04g072030.1.1 | Tomato | cytosol | 56.73 | 54.96 |
| PGSC0003DMT400064542 | Potato | cytosol | 56.42 | 54.67 |
| Os03t0260000-01 | Rice | cytosol | 55.35 | 53.39 |
| TraesCS4B01G217700.1 | Wheat | cytosol | 51.99 | 53.29 |
| PGSC0003DMT400050652 | Potato | cytosol | 49.69 | 52.85 |
| Zm00001d028495_P001 | Maize | cytosol | 54.28 | 52.67 |
| TraesCS4D01G217900.1 | Wheat | cytosol | 53.36 | 52.64 |
| GSMUA_Achr8P19650_001 | Banana | cytosol, mitochondrion | 44.8 | 52.6 |
| EER95148 | Sorghum | cytosol | 54.28 | 52.44 |
| PGSC0003DMT400095128 | Potato | cytosol | 34.86 | 51.94 |
| TraesCS4A01G086700.1 | Wheat | cytosol | 52.6 | 51.81 |
| KXG39737 | Sorghum | cytosol | 51.22 | 51.22 |
| TraesCS4A01G213700.1 | Wheat | cytosol | 46.33 | 51.18 |
| HORVU4Hr1G061820.3 | Barley | plastid | 53.21 | 51.18 |
| PGSC0003DMT400064541 | Potato | cytosol | 47.86 | 51.14 |
| PGSC0003DMT400072601 | Potato | cytosol | 48.32 | 51.05 |
| TraesCS4D01G098800.1 | Wheat | cytosol | 51.38 | 49.12 |
| Os04t0129900-01 | Rice | cytosol | 51.07 | 48.83 |
| Zm00001d028497_P001 | Maize | cytosol | 46.18 | 48.4 |
| Solyc11g069980.1.1 | Tomato | cytosol | 54.43 | 44.56 |
| PGSC0003DMT400064491 | Potato | cytosol | 26.61 | 43.94 |
| CDY24530 | Canola | cytosol, nucleus, plasma membrane | 31.35 | 32.33 |
| CDY42672 | Canola | cytosol | 25.23 | 26.4 |
| CDX89053 | Canola | cytosol | 25.23 | 26.36 |
| CDX71832 | Canola | cytosol | 25.08 | 26.24 |
| CDY41188 | Canola | cytosol | 24.92 | 26.08 |
| CDX84001 | Canola | cytosol | 24.46 | 26.06 |
| CDY52026 | Canola | cytosol | 24.46 | 26.06 |
| CDY33737 | Canola | cytosol | 24.31 | 25.9 |
| CDX81675 | Canola | cytosol | 24.31 | 25.9 |
| CDY35022 | Canola | cytosol | 11.01 | 25.09 |
| CDY27661 | Canola | cytosol | 23.39 | 25.08 |
| CDY23444 | Canola | cytosol | 23.55 | 24.92 |
| CDX99702 | Canola | cytosol | 23.24 | 24.92 |
| CDY25074 | Canola | cytosol | 23.24 | 24.92 |
| CDX67862 | Canola | cytosol | 23.24 | 24.92 |
| CDY30477 | Canola | cytosol | 23.39 | 24.76 |
| CDX67529 | Canola | cytosol | 23.09 | 24.75 |
| CDY13364 | Canola | cytosol | 22.78 | 24.43 |
| CDY35023 | Canola | cytosol | 11.77 | 22.19 |
| CDY48440 | Canola | cytosol | 24.92 | 20.2 |
| CDY28314 | Canola | cytosol | 24.77 | 20.1 |
| CDY46101 | Canola | cytosol | 24.46 | 19.93 |
| CDX68994 | Canola | cytosol | 24.62 | 19.8 |
| CDX72418 | Canola | cytosol | 24.31 | 19.13 |
| CDX75370 | Canola | cytosol | 24.46 | 19.05 |
| CDX94910 | Canola | cytosol | 12.39 | 17.05 |
| CDY29721 | Canola | cytosol | 3.82 | 16.13 |
| CDY20643 | Canola | cytosol | 13.46 | 13.9 |
| CDY33414 | Canola | cytosol | 16.36 | 13.77 |
| CDY31035 | Canola | cytosol | 13.15 | 13.74 |
| CDY42203 | Canola | cytosol | 16.36 | 13.61 |
| CDY25877 | Canola | plastid | 15.9 | 12.64 |
| CDX93442 | Canola | cytosol | 16.21 | 11.64 |
| CDY34897 | Canola | cytosol | 15.6 | 11.15 |
| CDY45889 | Canola | cytosol | 15.6 | 11.09 |
| CDY04455 | Canola | cytosol | 15.44 | 11.0 |
| CDY44550 | Canola | cytosol | 15.6 | 10.58 |
| CDY50514 | Canola | plastid | 12.08 | 10.31 |
| CDY27283 | Canola | cytosol | 11.31 | 9.7 |
| CDX94909 | Canola | mitochondrion | 10.24 | 9.22 |
| CDY29720 | Canola | cytosol, extracellular | 4.59 | 7.01 |
Protein Annotations
| Gene3D:1.20.120.1240 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078H6D0 | UniProt:A0A078H6D0 | EnsemblPlants:CDY34120 |
| ProteinID:CDY34120 | ProteinID:CDY34120.1 | InterPro:Dynamin_GTPase | InterPro:Dynamin_SF | InterPro:Dynamin_central | InterPro:GED |
| InterPro:GED_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00056070001 | InterPro:G_DYNAMIN_dom | InterPro:IPR020850 | InterPro:IPR030381 |
| InterPro:P-loop_NTPase | PFAM:PF00350 | PFAM:PF01031 | PFAM:PF02212 | PRINTS:PR00195 | PFscan:PS51388 |
| PFscan:PS51718 | PANTHER:PTHR11566 | PANTHER:PTHR11566:SF135 | SMART:SM00053 | SMART:SM00302 | SUPFAM:SSF52540 |
| UniParc:UPI0004EDEB9C | : | : | : | : | : |
Description
BnaC01g28600DBnaC01g28600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6D0]
Coordinates
chrLK032329:+:145948..147979
Molecular Weight (calculated)
72893.3 Da
IEP (calculated)
4.909
GRAVY (calculated)
-0.123
Length
654 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSKMPEVY DINVEAALTI VPTEAPIVSS YNDRIRPLLD TVDRLRNLNV MKEGIQLPTI VVVGDQSSGK SSVLESLAGI SLPRGQGICT RVPLVMRLQR
101: SPSPEPEIWL EFGDERVDTD EEHIAESICT ATEAIAGSGK GVSDTPLTLH VKKNGVPDLT MVDLPGITRV PVNGQPENIY EQISGMIMKY IEPQESIILN
201: VLSATVDFTT CESIRMSRQV DKTGERTLAV VTKADMAPEG LLQKVTADDV NIGLGYVCVR NRVGEETYKE ARMQEESLFK THPLLCMIDH DIVGIPVLAQ
301: KLIQIQATMI GRCLPVIVQK INEKMETSEF ELKKLPMVMT SSGEALMTFM NIIGSVKECL LRILIQGDFS EYPDDQSMHS TARLADMLSE FSDNLQAKPE
401: AANEFLMDEI KVLEECKCIG LPNFIPRSAF LAILSQRVDG MHAKPVEFIR EIWDYVEVVL SSVITKYSDN FPQIQPSIKR AGRTLITKIK EQSVSRVVEI
501: VEMEKQTDYT CNPEYMTAYT QKIANQASFI SHVQSNYSNY GDVGISHLRG YNSQLLSQAF DMNVRITAYW TIVVRRVVDN IALYLQFTVK NLVNSQFQKE
601: IVAEMVDPRG GGEVEKMLDE SPSVACKREK LKNSIKLLKE SKDAVAAIVY RNSG
101: SPSPEPEIWL EFGDERVDTD EEHIAESICT ATEAIAGSGK GVSDTPLTLH VKKNGVPDLT MVDLPGITRV PVNGQPENIY EQISGMIMKY IEPQESIILN
201: VLSATVDFTT CESIRMSRQV DKTGERTLAV VTKADMAPEG LLQKVTADDV NIGLGYVCVR NRVGEETYKE ARMQEESLFK THPLLCMIDH DIVGIPVLAQ
301: KLIQIQATMI GRCLPVIVQK INEKMETSEF ELKKLPMVMT SSGEALMTFM NIIGSVKECL LRILIQGDFS EYPDDQSMHS TARLADMLSE FSDNLQAKPE
401: AANEFLMDEI KVLEECKCIG LPNFIPRSAF LAILSQRVDG MHAKPVEFIR EIWDYVEVVL SSVITKYSDN FPQIQPSIKR AGRTLITKIK EQSVSRVVEI
501: VEMEKQTDYT CNPEYMTAYT QKIANQASFI SHVQSNYSNY GDVGISHLRG YNSQLLSQAF DMNVRITAYW TIVVRRVVDN IALYLQFTVK NLVNSQFQKE
601: IVAEMVDPRG GGEVEKMLDE SPSVACKREK LKNSIKLLKE SKDAVAAIVY RNSG
001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
Arabidopsis Description
DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.