Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400064491 | Potato | cytosol | 54.9 | 60.86 |
PGSC0003DMT400064541 | Potato | cytosol | 75.63 | 54.25 |
KRH11082 | Soybean | cytosol | 18.0 | 54.11 |
PGSC0003DMT400072601 | Potato | cytosol | 70.84 | 50.24 |
PGSC0003DMT400064542 | Potato | cytosol | 76.08 | 49.48 |
CDY36456 | Canola | cytosol | 19.82 | 46.77 |
CDY03289 | Canola | cytosol | 51.03 | 42.42 |
CDY34117 | Canola | cytosol | 51.03 | 42.42 |
KRH42928 | Soybean | cytosol | 56.04 | 41.07 |
PGSC0003DMT400050652 | Potato | cytosol | 56.95 | 40.65 |
KRH21190 | Soybean | cytosol | 58.77 | 38.8 |
KRH59040 | Soybean | cytosol | 59.45 | 38.67 |
PGSC0003DMT400094747 | Potato | cytosol | 35.76 | 38.01 |
Zm00001d028497_P001 | Maize | cytosol | 52.62 | 37.02 |
CDY47216 | Canola | cytosol | 44.65 | 36.43 |
TraesCS4B01G217700.1 | Wheat | cytosol | 51.71 | 35.58 |
TraesCS4D01G217900.1 | Wheat | cytosol | 53.53 | 35.44 |
Bra027151.1-P | Field mustard | cytosol | 54.21 | 35.26 |
CDY34120 | Canola | cytosol | 51.94 | 34.86 |
Bra031502.1-P | Field mustard | cytosol | 51.71 | 34.71 |
CDY24536 | Canola | cytosol | 51.71 | 34.71 |
CDY53046 | Canola | cytosol | 53.08 | 34.57 |
HORVU4Hr1G061820.3 | Barley | plastid | 53.53 | 34.56 |
AT1G60500.1 | Thale cress | mitochondrion | 52.62 | 34.53 |
Os03t0260000-01 | Rice | cytosol | 52.85 | 34.22 |
TraesCS4A01G086700.1 | Wheat | cytosol | 51.25 | 33.89 |
Zm00001d028495_P001 | Maize | cytosol | 51.71 | 33.68 |
EER95148 | Sorghum | cytosol | 51.94 | 33.68 |
KRH21193 | Soybean | cytosol | 38.04 | 33.67 |
CDY53048 | Canola | cytosol | 38.27 | 33.6 |
AT1G60530.1 | Thale cress | cytosol | 23.01 | 33.55 |
CDY02039 | Canola | cytosol, plastid | 42.6 | 33.45 |
CDY53047 | Canola | cytosol | 7.29 | 32.99 |
KXG39737 | Sorghum | cytosol | 48.97 | 32.87 |
Bra031505.1-P | Field mustard | cytosol | 42.82 | 32.87 |
GSMUA_Achr8P19650_001 | Banana | cytosol, mitochondrion | 41.69 | 32.85 |
Os04t0129900-01 | Rice | cytosol | 50.34 | 32.31 |
TraesCS4D01G098800.1 | Wheat | cytosol | 50.11 | 32.16 |
CDY47217 | Canola | cytosol | 37.36 | 31.91 |
TraesCS4A01G213700.1 | Wheat | cytosol | 42.14 | 31.25 |
PGSC0003DMT400088564 | Potato | cytosol | 8.66 | 30.89 |
Bra010250.1-P | Field mustard | cytosol | 22.55 | 25.06 |
CDY23281 | Canola | cytosol | 22.1 | 24.49 |
Bra031511.1-P | Field mustard | cytosol | 25.06 | 17.8 |
CDY24530 | Canola | cytosol, nucleus, plasma membrane | 25.06 | 17.35 |
PGSC0003DMT400051417 | Potato | cytosol | 19.82 | 15.73 |
PGSC0003DMT400004319 | Potato | cytosol | 21.64 | 15.47 |
PGSC0003DMT400000646 | Potato | cytosol | 21.41 | 15.41 |
PGSC0003DMT400004655 | Potato | cytosol | 20.96 | 15.08 |
PGSC0003DMT400028286 | Potato | cytosol | 20.96 | 15.03 |
PGSC0003DMT400004228 | Potato | cytosol | 8.43 | 13.07 |
PGSC0003DMT400014025 | Potato | cytosol | 16.86 | 9.6 |
PGSC0003DMT400032399 | Potato | plastid | 15.49 | 8.24 |
PGSC0003DMT400065607 | Potato | cytosol | 2.96 | 6.34 |
Protein Annotations
Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | InterPro:Dynamin_SF | InterPro:Dynamin_central | InterPro:GED |
InterPro:GED_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
GO:GO:0005525 | GO:GO:0016787 | InterPro:G_DYNAMIN_dom | InterPro:IPR020850 | InterPro:IPR030381 | UniProt:M1DVN0 |
InterPro:P-loop_NTPase | PFAM:PF00350 | PFAM:PF01031 | PFAM:PF02212 | EnsemblPlantsGene:PGSC0003DMG400044699 | PGSC:PGSC0003DMG400044699 |
EnsemblPlants:PGSC0003DMT400095128 | PFscan:PS51388 | PFscan:PS51718 | PANTHER:PTHR11566 | PANTHER:PTHR11566:SF135 | SUPFAM:SSF52540 |
UniParc:UPI00029662E7 | : | : | : | : | : |
Description
Interferon-induced GTP-binding protein mx [Source:PGSC_GENE;Acc:PGSC0003DMG400044699]
Coordinates
chr10:-:55876916..55878306
Molecular Weight (calculated)
50412.9 Da
IEP (calculated)
6.091
GRAVY (calculated)
-0.194
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDLPGISRV PVQGQPEDIY EQIFDIIKTY ISPQETIILN VLSTTVDFPT CESIRMSQKV DKTGERTLAV VTKGDIAPEG LLEKVIADEV NIRLGYICVR
101: NRIENETYEE ARKNEAKLFS THPLLSKIDK SMVGVPVLAQ KLVFIQANII SKFLSEIERK INDKLATNMA ELNRLPQHLS SVAVMRILTK LVEMLDQYSN
201: ELHSKNFDEK EDFLMEEIKA LEETNGIGLP NFLPRHLFLS AMQKRVKEVA LIPEDFVDRV WNYIERIVME VLMHHCENYP QLQSSTRRAA QNLIVKKKNE
301: SVEWVKEIIG MEKQTDYTCN PGYLATYNKL TGQQQTFMEI IYNPGKVSVV SLKGLGQIDG HLRKHLGLVQ QAFDMKMRVI AYWKIVLMRL VDSMALHIMF
401: TIQKMINKDM EEEIVQELMA PRGGGIERML DEPPMIAEK
101: NRIENETYEE ARKNEAKLFS THPLLSKIDK SMVGVPVLAQ KLVFIQANII SKFLSEIERK INDKLATNMA ELNRLPQHLS SVAVMRILTK LVEMLDQYSN
201: ELHSKNFDEK EDFLMEEIKA LEETNGIGLP NFLPRHLFLS AMQKRVKEVA LIPEDFVDRV WNYIERIVME VLMHHCENYP QLQSSTRRAA QNLIVKKKNE
301: SVEWVKEIIG MEKQTDYTCN PGYLATYNKL TGQQQTFMEI IYNPGKVSVV SLKGLGQIDG HLRKHLGLVQ QAFDMKMRVI AYWKIVLMRL VDSMALHIMF
401: TIQKMINKDM EEEIVQELMA PRGGGIERML DEPPMIAEK
001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC
Arabidopsis Description
DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.