Factsheet for Bra031502.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24536	Canola	cytosol	99.54	99.54
Bra027151.1-P	Field mustard	cytosol	78.29	75.85
Bra031505.1-P	Field mustard	cytosol	66.21	75.7
Bra010250.1-P	Field mustard	cytosol	43.12	71.39
PGSC0003DMT400088564	Potato	cytosol	11.62	61.79
KRH11082	Soybean	cytosol	12.84	57.53
Solyc04g072030.1.1	Tomato	cytosol	56.42	54.67
PGSC0003DMT400064542	Potato	cytosol	56.12	54.37
Os03t0260000-01	Rice	cytosol	55.05	53.1
TraesCS4B01G217700.1	Wheat	cytosol	51.68	52.98
PGSC0003DMT400050652	Potato	cytosol	49.54	52.68
Zm00001d028495_P001	Maize	cytosol	54.28	52.67
GSMUA_Achr8P19650_001	Banana	cytosol, mitochondrion	44.8	52.6
TraesCS4D01G217900.1	Wheat	cytosol	53.06	52.34
EER95148	Sorghum	cytosol	53.98	52.14
PGSC0003DMT400095128	Potato	cytosol	34.71	51.71
TraesCS4A01G086700.1	Wheat	cytosol	52.29	51.51
KXG39737	Sorghum	cytosol	51.07	51.07
HORVU4Hr1G061820.3	Barley	plastid	53.06	51.03
PGSC0003DMT400072601	Potato	cytosol	48.17	50.89
TraesCS4A01G213700.1	Wheat	cytosol	46.02	50.84
PGSC0003DMT400064541	Potato	cytosol	47.4	50.65
TraesCS4D01G098800.1	Wheat	cytosol	51.07	48.83
Os04t0129900-01	Rice	cytosol	50.92	48.68
Zm00001d028497_P001	Maize	cytosol	46.02	48.24
Solyc11g069980.1.1	Tomato	cytosol	53.98	44.18
PGSC0003DMT400064491	Potato	cytosol	26.3	43.43
Bra031511.1-P	Field mustard	cytosol	30.58	32.36
Bra014507.1-P	Field mustard	cytosol	25.23	26.36
Bra007513.1-P	Field mustard	cytosol	25.08	26.24
Bra016679.1-P	Field mustard	cytosol	24.46	26.06
Bra026801.1-P	Field mustard	cytosol	24.31	25.9
Bra025448.1-P	Field mustard	cytosol	22.48	25.21
Bra037643.1-P	Field mustard	cytosol	23.39	24.76
Bra028525.1-P	Field mustard	cytosol	22.94	24.59
Bra003469.1-P	Field mustard	cytosol	21.1	24.0
Bra034579.1-P	Field mustard	cytosol	24.92	20.2
Bra011458.1-P	Field mustard	cytosol	24.46	19.83
Bra036991.1-P	Field mustard	cytosol	24.31	19.7
Bra038229.1-P	Field mustard	cytosol	16.51	13.74
Bra038100.1-P	Field mustard	cytosol	14.98	11.95
Bra019950.1-P	Field mustard	cytosol	16.21	11.29
Bra018449.1-P	Field mustard	cytosol	15.6	11.17
Bra031707.1-P	Field mustard	cytosol	15.6	11.15
Bra017901.1-P	Field mustard	cytosol	15.6	10.79
Bra035433.1-P	Field mustard	cytosol	15.6	10.19
Bra037604.1-P	Field mustard	plastid	11.62	9.87

Protein Annotations

Gene3D:1.20.120.1240	Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra031502	EnsemblPlants:Bra031502.1	EnsemblPlants:Bra031502.1-P
InterPro:Dynamin_GTPase	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:M4ERS6	InterPro:P-loop_NTPase	PFAM:PF00350
PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	PFscan:PS51388	PFscan:PS51718	PANTHER:PTHR11566
PANTHER:PTHR11566:SF135	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540	UniParc:UPI0002544C87	:

Description

AT1G60500 (E=2e-289) | dynamin family protein

Coordinates

chrA01:+:16935485..16937518

Molecular Weight (calculated)

72976.5 Da

IEP (calculated)

5.006

GRAVY (calculated)

-0.114

Length

654 amino acids

Sequence
(BLAST)

001: MGGSKMPEVY DINVEAALTI VPTEAPIVSS YNDRIRPLLD TVDRLRNLNV MKEGIQLPTI VVVGDQSSGK SSVLESLAGI SLPRGQGICT RVPLVMRLQR
101: SPSPEPEIWL EFGDERVDTD EEHIAESICT ATEAIAGSGK GVSDTPLTLH VKKNGVPDLT MVDLPGITRV PVNGQPENIY EQISGMIMKY IEPQESIILN
201: VLSATVDFTT CESIRMSRQV DKTGERTLAV VTKADMAPEG LLQKVTADDV NIGLGYVCVR NRVGEETYKE ARMQEELLFK THPLLCMIDH DIVGIPVLAQ
301: KLIQIQATMI GRCLPVIVQK INEKMETSEF ELKKLPMVMT SSGEALMTFM NIIGYVKECL LRILIQGDFS EYPDDQSMHS TARLADMLSK FSDNLQAKPE
401: AANEFLIDEI KVLEECKCIG LPNFIPRTAF LAILSQRVDG MHAKPVEFIR EIWDYVEVVL SSVITKYSDN FPQIQPSIKR AGRTLITKIK EQSVSRVVEI
501: VEMEKQTDYT CNPEYMTAYT QKIANQASFV SHVQSNYSNY GDVGISHLRG YNSQLLSQAF DMNVRITAYW TIVVRRVVDN IALYLQFTVK NLVNSQFQKE
601: IVAEMVDPRG GGEVEKMLDE SPSVACKREK LKNSIKLLKE SKDAVAAIVY RNSG

Best Arabidopsis Sequence Match ( AT1G60500.1 )
(BLAST)

001: MVKKKVATKK NSPSLAIAKK KSRSNKDVVS VEAPIISSYN DRIRPLLDTV DRLRNLNVMR EGIHLPTIVV VGDQSSGKSS VLESLAGISL PRGQGICTRV
101: PLVMRLQRSS SPEPEIWLEY NDKVVPTDEE HIAEAIRAAT DVIAGSGKGV SDAPLTLHVK KAGVPDLTMV DLPGITRVPV NGQPENIYEQ ISGMIMEYIE
201: PQESIILNVL SATVDFTTCE SIRMSRKVDK TGQRTLAVVT KADMAPEGLL QKVTADDVSI VLGYVCVRNR IGEETYEEAR MQEELLFRTH PVLSLIDEDI
301: VGIPVLAQKL MLIQSSMIAR CLPKIVSKIN QKLDTAVLEL NKLPMVMAST GEALMALMDI IGSAKESLLR ILVQGDFSEY PDDQNMHCTA RLADMLSQFS
401: DSLQAKPKEV AEFLMDEIKI LDECKCVGLP NFIPRSAFLA ILSQHVDGIQ DKPVEFINKI WDYIEDVLSS VTAKRSDNFP QIQSSIKRAG RNLISKIKEQ
501: SVNRVMEIVE MEKLTDYTCN PEYMTSWTQK TSAQESFIDA VVKNENIPDY FSVTGFGNVK ISHLRKYHAH LLIPAFDMKM RITSYWKIVL RRIVDNLALY
601: LQLSVKSLVN TRFQKEIVAE MVDPRDGGGV EKMLEESPLV ASKREKLQNS IKLLKESKDA VAAIVDQNC

Arabidopsis Description

DRP4CDynamin-related protein 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9ZP55]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.