Factsheet for Bra016679.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000163.1-P
Bra002727.1-P
Bra006819.1-P
Bra016728.1-P
Bra017039.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14830.1	Bra016728.1-P	AT1G13520.1	21798944
AT1G14830.1	Bra000163.1-P	AT2G40060.1	18502847
AT1G14830.1	Bra017039.1-P	AT2G40060.1	18502847
AT1G14830.1	Bra002727.1-P	AT5G57460.1	24529374
AT1G14830.1	Bra006819.1-P	AT5G57460.1	24529374

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52026	Canola	cytosol	99.67	99.67
AT1G14830.1	Thale cress	cytosol	97.39	97.39
Bra026801.1-P	Field mustard	cytosol	97.39	97.39
KRH41722	Soybean	endoplasmic reticulum, nucleus	86.97	86.55
KRH60421	Soybean	endoplasmic reticulum	86.97	86.55
VIT_01s0011g05800.t01	Wine grape	cytosol	84.36	84.5
GSMUA_Achr2P21630_001	Banana	cytosol	83.71	84.4
KRH70357	Soybean	endoplasmic reticulum, nucleus	83.88	83.33
KRH49665	Soybean	endoplasmic reticulum	83.55	83.01
GSMUA_Achr7P11190_001	Banana	cytosol	82.74	83.01
Zm00001d013426_P002	Maize	plasma membrane	81.6	82.0
Solyc01g005310.2.1	Tomato	plastid	83.06	81.99
Zm00001d033751_P003	Maize	plasma membrane	81.11	81.51
KXG37727	Sorghum	cytosol, mitochondrion	81.11	81.37
Os03t0713100-01	Rice	plasma membrane	80.62	81.01
TraesCS4A01G266600.1	Wheat	cytosol	80.46	80.98
TraesCS4B01G047700.1	Wheat	cytosol	80.46	80.98
TraesCS4D01G047600.1	Wheat	golgi, nucleus, unclear	80.46	80.98
PGSC0003DMT400051417	Potato	cytosol	71.5	79.39
Bra007513.1-P	Field mustard	cytosol	77.36	76.0
Bra014507.1-P	Field mustard	cytosol	77.2	75.72
HORVU4Hr1G007880.11	Barley	cytosol	78.18	75.59
Bra037643.1-P	Field mustard	cytosol	71.99	71.52
Bra028525.1-P	Field mustard	cytosol	66.12	66.56
Bra003469.1-P	Field mustard	cytosol	62.05	66.26
Bra025448.1-P	Field mustard	cytosol	62.7	66.04
Bra036991.1-P	Field mustard	cytosol	35.02	26.64
Bra011458.1-P	Field mustard	cytosol	34.85	26.52
Bra034579.1-P	Field mustard	cytosol	34.69	26.39
Bra031505.1-P	Field mustard	cytosol	22.8	24.48
Bra031502.1-P	Field mustard	cytosol	26.06	24.46
Bra027151.1-P	Field mustard	cytosol	25.9	23.56
Bra010250.1-P	Field mustard	cytosol	15.15	23.54
Bra031707.1-P	Field mustard	cytosol	28.66	19.23
Bra018449.1-P	Field mustard	cytosol	28.18	18.95
Bra019950.1-P	Field mustard	cytosol	28.83	18.85
Bra017901.1-P	Field mustard	cytosol	28.18	18.31
Bra035433.1-P	Field mustard	cytosol	28.18	17.28
Bra038229.1-P	Field mustard	cytosol	19.87	15.52
Bra038100.1-P	Field mustard	cytosol	18.4	13.78
Bra031511.1-P	Field mustard	cytosol	11.73	11.65
Bra037604.1-P	Field mustard	plastid	14.17	11.3

Protein Annotations

Gene3D:1.20.120.1240	MapMan:22.1.7.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra016679	EnsemblPlants:Bra016679.1	EnsemblPlants:Bra016679.1-P
InterPro:Dynamin_GTPase	InterPro:Dynamin_GTPase_CS	InterPro:Dynamin_SF	InterPro:Dynamin_central	InterPro:GED	InterPro:GED_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	InterPro:G_DYNAMIN_dom	InterPro:IPR020850	InterPro:IPR030381	UniProt:M4DJK1	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF01031	PFAM:PF02212	PRINTS:PR00195	ScanProsite:PS00410	PFscan:PS51388
PFscan:PS51718	PANTHER:PTHR11566	PANTHER:PTHR11566:SF80	SMART:SM00053	SMART:SM00302	SUPFAM:SSF52540
UniParc:UPI0002545A87	SEG:seg	:	:	:	:

Description

AT1G14830 (E=0.0) ADL1C, ADL5, DRP1C | ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase

Coordinates

chrA08:+:19530165..19533619

Molecular Weight (calculated)

68804.6 Da

IEP (calculated)

7.904

GRAVY (calculated)

-0.367

Length

614 amino acids

Sequence
(BLAST)

001: MATMKSLIGL INKIQRACTV LGDHGGEGMS LWEALPTVAV VGGQSSGKSS VLESVVGRDF LPRGSGIVTR RPLVLQLHKT EEGTTEYAEF LHAPRKKFTD
101: FAAVRKEIED ETDRITGKSK QISNKPIQLS IYSPNVVNLT LIDLPGLTKV AVEGQPDSIV QDIENMVRSY VEKPNCIILA ISPANQDIAT SDAIKLAREV
201: DPTGERTFGV ATKLDIMDKG TDCLDVLEGR SYRLQHPWVG IVNRSQADIN KRVDMIAARR KEREYFETSP EYGHLASRMG SEYLAKLLSQ HLETVIRQKI
301: PSIVALINKS IDEINAELDR IGRPIAVDSG AQLYTILELC RAFDRVFKEH LDGGRPGGDR IYGVFDHQLP AALKKLPFDR HLSTRNVQKV VSEADGYQPH
401: LIAPEQGYRR LIDGSISYFK GPAEATVDAV HFVLKELVSK SISETEELKR FPTLASDIAA AANEALERFR DESRKTVLRL VDMESSYLTV EFFRKLHLEP
501: EKEKPNQRNA PPPNADIHSD NHFRKIGSNV SAYINMVCDT LRISLPKAVV YCQVREAKRS LLNFFYAQVG RKEKEKLGGM LDEDPQLMER RGTLAKRLEL
601: YKQARDDIDA VAWK

Best Arabidopsis Sequence Match ( AT1G14830.1 )
(BLAST)

001: MATMKSLIGL INKIQRACTV LGDHGGEGMS LWEALPTVAV VGGQSSGKSS VLESVVGRDF LPRGSGIVTR RPLVLQLHKT EDGTTEYAEF LHAPKKRFAD
101: FAAVRKEIED ETDRITGKSK QISNIPIQLS IYSPNVVNLT LIDLPGLTKV AVDGQPESIV QDIENMVRSY VEKPNCIILA ISPANQDIAT SDAIKLAREV
201: DPTGERTFGV ATKLDIMDKG TDCLDVLEGR SYRLQHPWVG IVNRSQADIN KRVDMIAARR KEQEYFETSP EYGHLASRMG SEYLAKLLSQ HLETVIRQKI
301: PSIVALINKS IDEINAELDR IGRPIAVDSG AQLYTILELC RAFDRVFKEH LDGGRPGGDR IYGVFDHQLP AALKKLPFDR HLSTKNVQKV VSEADGYQPH
401: LIAPEQGYRR LIDGSISYFK GPAEATVDAV HFVLKELVRK SISETEELKR FPTLASDIAA AANEALERFR DESRKTVLRL VDMESSYLTV EFFRKLHLEP
501: EKEKPNPRNA PAPNADPYSD NHFRKIGSNV SAYINMVCDT LRNSLPKAVV YCQVREAKRS LLNFFYAQVG RKEKEKLGAM LDEDPQLMER RGTLAKRLEL
601: YKQARDDIDA VAWK

Arabidopsis Description

DRP1CDRP1C [Source:UniProtKB/TrEMBL;Acc:A0A178W4V6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.