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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000163.1-P
Bra000201.1-P
Bra000335.1-P
Bra001010.1-P
Bra001415.1-P
Bra002259.1-P
Bra002427.1-P
Bra003009.1-P
Bra003016.1-P
Bra004269.1-P
Bra005531.1-P
Bra005688.1-P
Bra006374.1-P
Bra006664.1-P
Bra008279.1-P
Bra009790.1-P
Bra010799.1-P
Bra012247.1-P
Bra012595.1-P
Bra013314.1-P
Bra013634.1-P
Bra016455.1-P
Bra016976.1-P
Bra017039.1-P
Bra017383.1-P
Bra018558.1-P
Bra018851.1-P
Bra019366.1-P
Bra020060.1-P
Bra020836.1-P
Bra021826.1-P
Bra022067.1-P
Bra022180.1-P
Bra022547.1-P
Bra022695.1-P
Bra022696.1-P
Bra022908.1-P
Bra023586.1-P
Bra025079.1-P
Bra025548.1-P
Bra025842.1-P
Bra026139.1-P
Bra026769.1-P
Bra027685.1-P
Bra027808.1-P
Bra028252.1-P
Bra028475.1-P
Bra028899.1-P
Bra029043.1-P
Bra030488.1-P
Bra034824.1-P
Bra036092.1-P
Bra036274.1-P
Bra036523.1-P
Bra036641.1-P
Bra038667.1-P
Bra039131.1-P
Bra040507.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G57460.1 Bra026139.1-P AT1G15370.1 24529374
AT5G57460.1 Bra026769.1-P AT1G15370.1 24529374
AT5G57460.1 Bra012247.1-P AT1G20760.1 24529374
AT5G57460.1 Bra016455.1-P AT1G20760.1 24529374
AT5G57460.1 Bra025842.1-P AT1G20760.1 24529374
AT5G57460.1 Bra018851.1-P AT1G50480.1 24529374
AT5G57460.1 Bra030488.1-P AT1G50480.1 24529374
AT5G57460.1 Bra027808.1-P AT1G63250.1 24529374
AT5G57460.1 Bra027685.1-P AT1G64190.1 24529374
AT5G57460.1 Bra004269.1-P AT1G67930.1 24529374
AT5G57460.1 Bra008279.1-P AT1G76810.1 24529374
AT5G57460.1 Bra017383.1-P AT2G03510.1 24529374
AT5G57460.1 Bra006374.1-P AT2G20800.1 24529374
AT5G57460.1 Bra023586.1-P AT2G20800.1 24529374
AT5G57460.1 Bra005531.1-P AT2G33040.1 24529374
AT5G57460.1 Bra021826.1-P AT2G33040.1 24529374
AT5G57460.1 Bra022908.1-P AT2G33040.1 24529374
AT5G57460.1 Bra000163.1-P AT2G40060.1 24529374
AT5G57460.1 Bra017039.1-P AT2G40060.1 24529374
AT5G57460.1 Bra000201.1-P AT2G40730.1 24529374
AT5G57460.1 Bra016976.1-P AT2G40730.1 24529374
AT5G57460.1 Bra000335.1-P AT2G43950.1 24529374
AT5G57460.1 Bra001010.1-P AT3G01280.1 24529374
AT5G57460.1 Bra006664.1-P AT3G01280.1 24529374
AT5G57460.1 Bra039131.1-P AT3G01280.1 24529374
AT5G57460.1 Bra040507.1-P AT3G01280.1 24529374
AT5G57460.1 Bra022067.1-P AT3G01780.1 24529374
AT5G57460.1 Bra001415.1-P AT3G11630.1 24529374
AT5G57460.1 Bra034824.1-P AT3G11630.1 24529374
AT5G57460.1 Bra038667.1-P AT3G11630.1 24529374
AT5G57460.1 Bra022180.1-P AT3G16810.1 24529374
AT5G57460.1 Bra036641.1-P AT3G16810.1 24529374
AT5G57460.1 Bra036092.1-P AT3G50590.1 24529374
AT5G57460.1 Bra018558.1-P AT4G02350.1 24529374
AT5G57460.1 Bra036274.1-P AT4G02350.1 24529374
AT5G57460.1 Bra012595.1-P AT4G18480.1 24529374
AT5G57460.1 Bra013314.1-P AT4G18480.1 24529374
AT5G57460.1 Bra013634.1-P AT4G22690.1 24529374
AT5G57460.1 Bra019366.1-P AT4G22690.1 24529374
AT5G57460.1 Bra020836.1-P AT4G22690.1 24529374
AT5G57460.1 Bra005688.1-P AT5G01380.1 24529374
AT5G57460.1 Bra028899.1-P AT5G01380.1 24529374
AT5G57460.1 Bra002259.1-P AT5G19760.1 24529374
AT5G57460.1 Bra020060.1-P AT5G19760.1 24529374
AT5G57460.1 Bra002427.1-P AT5G22770.1 24529374
AT5G57460.1 Bra009790.1-P AT5G24710.1 24529374
AT5G57460.1 Bra010799.1-P AT5G24710.1 24529374
AT5G57460.1 Bra036523.1-P AT5G24710.1 24529374
AT5G57460.1 Bra025548.1-P AT5G40770.1 24529374
AT5G57460.1 Bra028475.1-P AT5G40770.1 24529374
AT5G57460.1 Bra025079.1-P AT5G45390.1 24529374
AT5G57460.1 Bra022547.1-P AT5G51430.1 24529374
AT5G57460.1 Bra028252.1-P AT5G51430.1 24529374
AT5G57460.1 Bra003016.1-P AT5G54100.1 24529374
AT5G57460.1 Bra022695.1-P AT5G54100.1 24529374
AT5G57460.1 Bra022696.1-P AT5G54100.1 24529374
AT5G57460.1 Bra029043.1-P AT5G54100.1 24529374
AT5G57460.1 Bra003009.1-P AT5G54160.1 24529374
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38299 Canola plastid 97.66 97.2
Bra006819.1-P Field mustard plastid 89.38 88.96
AT5G57460.1 Thale cress cytosol 88.75 87.93
KRG90331 Soybean endoplasmic reticulum 70.78 71.9
KRH02873 Soybean endoplasmic reticulum, nucleus 70.47 71.59
VIT_11s0052g00920.t01 Wine grape mitochondrion 67.03 69.08
PGSC0003DMT400029685 Potato cytosol, plastid 66.25 66.77
Solyc10g078790.1.1 Tomato nucleus 66.09 66.61
GSMUA_Achr3P27960_001 Banana plastid 59.69 58.32
HORVU2Hr1G002480.5 Barley cytosol 37.03 55.5
Os08t0243900-01 Rice plasma membrane, plastid 55.47 55.38
EES14778 Sorghum plastid 54.69 54.95
TraesCS2B01G003600.1 Wheat plastid 53.75 54.52
TraesCS2D01G014900.1 Wheat plastid 53.91 54.16
TraesCS2A01G014200.1 Wheat plastid 53.44 53.86
Zm00001d024416_P001 Maize plasma membrane 53.59 53.85
HORVU2Hr1G002410.2 Barley plastid 54.06 50.22
Protein Annotations
EnsemblPlants:Bra002727.1EnsemblPlants:Bra002727.1-PEnsemblPlantsGene:Bra002727GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015031GO:GO:0016020InterPro:AP2_Mu_C_sfInterPro:IPR028565InterPro:MHDInterPro:Muniscin_C
PANTHER:PTHR37769PFAM:PF10291PFscan:PS51072SEG:segSUPFAM:SSF49447UniParc:UPI0002544F8D
UniProt:M4CEU5MapMan:22.1.4.2::::
Description
AT5G57460 (E=2e-299) | unknown protein
Coordinates
chrA10:+:7983168..7985090
Molecular Weight (calculated)
69698.2 Da
IEP (calculated)
4.971
GRAVY (calculated)
-0.237
Length
640 amino acids
Sequence
(BLAST)
001: MSCLALALQP SNGSDILLQT REWFPPARAL IALSFFRQTR QAFSPAKHPH SNPKQKQPPS SAADPDDATA AEFVGDDPLA ASNGQVIVGV ESKYRVVYRL
101: VNSIYILGVT VADHDDNSIN VFECIRIVNQ AVSVIVTACR GVDVTPEKLG RKYAEVYMAL DIVLRGVSNI RLAAMLGSMH GDGIAKMVHS ALDTENKIRG
201: GGSWASVESH AAEHLASVQA FSSARFELPL ETIAAGDEMA ASLAPVVVQE SEELKEEMEE TESLDPFAAS ETVNKEKELV GGFKKTKDPS SKDLTLALAG
301: LEVTTLPPAE ATQSTHINVE GFEGEYGGIE FSNEQASIGE TFESFSDAWG GGLDPSEFMG PKKIHKKEGL GGLELLHTSD PKAVEGKDGG NVDNLVKKPE
401: MKGPEMYISE EIRTEFRESL LARVGLMGVV YLKTMPPKGS GEEKETEFSF RVEGTSPVKR FAMQSSRVSS LGNGLFHVRT APSEEPIPIL KYSLQPKLTP
501: LPLRVRMVKR VSGTLLSLMI QYVSSPELPQ PLKNVDFVLK LPVDPTLLKV SPKAVLNRTD RELKWQVPEI PLTGSPGRLR ARMPLDSENS EEEAEIICYV
601: KFSVQGSSSL SGITLRAAAE GNTDFYEVDH RFETGVYMCN
Best Arabidopsis Sequence Match ( AT5G57460.1 )
(BLAST)
001: MSCLALALQP ANGSDILLQT REWFPPARAL IALSYFRQMR QALASSKQQH QQQSNQKQNQ ASSSSSSSSS VADPDDATAA EFVGDDPLAA SNGQVIVGVE
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
Arabidopsis Description
At5g57460 [Source:UniProtKB/TrEMBL;Acc:Q9FKM4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.