Factsheet for Bra034824.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000234.1-P
Bra004639.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11630.1	Bra000234.1-P	AT2G41680.1	25448674
AT3G11630.1	Bra004639.1-P	AT2G41680.1	25448674

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08508	Canola	plastid	98.08	98.08
CDY01041	Canola	plastid	92.72	93.08
GSMUA_Achr3P02970_001	Banana	cytosol	14.18	86.05
AT3G11630.1	Thale cress	plastid	83.52	81.95
Bra038667.1-P	Field mustard	plastid	68.58	79.56
Bra009181.1-P	Field mustard	plastid	78.93	76.58
Zm00001d050666_P001	Maize	plastid	73.56	73.85
Os02t0537700-01	Rice	extracellular	73.56	73.56
TraesCS2D01G295500.2	Wheat	plastid	72.03	72.87
TraesCS2A01G297500.1	Wheat	plastid	72.03	72.87
EES06920	Sorghum	plastid	72.41	72.69
Zm00001d016736_P001	Maize	extracellular, mitochondrion, plastid	72.03	72.31
VIT_08s0007g02490.t01	Wine grape	plastid	75.1	71.79
TraesCS2B01G313700.1	Wheat	golgi, plastid	72.03	71.76
HORVU2Hr1G073760.2	Barley	plastid	71.65	71.37
PGSC0003DMT400072569	Potato	cytosol, extracellular, plastid	72.03	70.41
Solyc01g007740.2.1	Tomato	plastid	71.26	69.66
Solyc10g082030.1.1	Tomato	plastid	71.26	69.66
Bra001415.1-P	Field mustard	plastid	80.08	68.08
PGSC0003DMT400042222	Potato	plastid	70.88	68.01
KRH67987	Soybean	endoplasmic reticulum	48.66	65.46
Bra038102.1-P	Field mustard	cytosol	19.92	24.07
Bra032241.1-P	Field mustard	cytosol	19.92	22.51

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.5.3.1	Gene3D:3.40.30.10	InterPro:AhpC/TSA	EnsemblPlantsGene:Bra034824	EnsemblPlants:Bra034824.1
EnsemblPlants:Bra034824.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016209	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454
GO:GO:0051920	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	UniProt:M4F178	PFAM:PF00578
PFAM:PF10417	PIRSF:PIRSF000239	PFscan:PS51352	PANTHER:PTHR10681	PANTHER:PTHR10681:SF140	InterPro:Peroxiredoxin_AhpC-typ
InterPro:Peroxiredoxin_C	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000254762D	SEG:seg

Description

AT3G11630 (E=7e-113) | 2-cys peroxiredoxin, chloroplast (BAS1)

Coordinates

chrA05:-:21588049..21589360

Molecular Weight (calculated)

28512.8 Da

IEP (calculated)

5.780

GRAVY (calculated)

-0.070

Length

261 amino acids

Sequence
(BLAST)

001: MASSVASSTA LISSTRVSSA KSSLPSPSSL SFLRTVSSPL RSGSALRSSL SSCSRRSFAV KAQADDLPLV GNKAPDFEAE AVFDQEFIKV KLSEYIGKKY
101: VILFFYPLDF TFVCPTEITA FSDRYAEFEK LNTEVLGVSV DSVFSHLAWV QTDRQSGGLG DLNYPLVSDV TKSISKSFGV LIHDQGIALR GLFIIDKEGV
201: IQHSTINNLG IGRSVDETMR TLQALQYIQE NPDEVCPAGW QPGEKSMKPD PKLSKEYFSA I

Best Arabidopsis Sequence Match ( AT3G11630.1 )
(BLAST)

001: MASVASSTTL ISSPSSRVFP AKSSLSSPSV SFLRTLSSPS ASASLRSGFA RRSSLSSTSR RSFAVKAQAD DLPLVGNKAP DFEAEAVFDQ EFIKVKLSDY
101: IGKKYVILFF YPLDFTFVCP TEITAFSDRH SEFEKLNTEV LGVSVDSVFS HLAWVQTDRK SGGLGDLNYP LISDVTKSIS KSFGVLIHDQ GIALRGLFII
201: DKEGVIQHST INNLGIGRSV DETMRTLQAL QYIQENPDEV CPAGWKPGEK SMKPDPKLSK EYFSAI

Arabidopsis Description

BAS12-Cys peroxiredoxin BAS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96291]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.