Factsheet for Bra001415.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000234.1-P
Bra004639.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11630.1	Bra000234.1-P	AT2G41680.1	25448674
AT3G11630.1	Bra004639.1-P	AT2G41680.1	25448674

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P02970_001	Banana	cytosol	12.38	88.37
Bra034824.1-P	Field mustard	plastid	68.08	80.08
AT3G11630.1	Thale cress	plastid	67.75	78.2
Bra009181.1-P	Field mustard	plastid	67.1	76.58
Bra038667.1-P	Field mustard	plastid	56.03	76.44
Os02t0537700-01	Rice	extracellular	63.19	74.33
CDX73858	Canola	plastid	71.34	73.24
EES06920	Sorghum	plastid	61.56	72.69
Zm00001d016736_P001	Maize	extracellular, mitochondrion, plastid	60.91	71.92
Zm00001d050666_P001	Maize	plastid	60.91	71.92
PGSC0003DMT400072569	Potato	cytosol, extracellular, plastid	62.22	71.54
TraesCS2A01G297500.1	Wheat	plastid	59.93	71.32
TraesCS2D01G295500.2	Wheat	plastid	59.93	71.32
Solyc10g082030.1.1	Tomato	plastid	61.24	70.41
Solyc01g007740.2.1	Tomato	plastid	60.91	70.04
HORVU2Hr1G073760.2	Barley	plastid	59.61	69.85
TraesCS2B01G313700.1	Wheat	golgi, plastid	59.61	69.85
VIT_08s0007g02490.t01	Wine grape	plastid	61.56	69.23
PGSC0003DMT400042222	Potato	plastid	60.91	68.75
KRH67987	Soybean	endoplasmic reticulum	40.72	64.43
Bra038102.1-P	Field mustard	cytosol	17.26	24.54
Bra032241.1-P	Field mustard	cytosol	17.26	22.94

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.5.3.1	Gene3D:3.40.30.10	InterPro:AhpC/TSA	EnsemblPlantsGene:Bra001415	EnsemblPlants:Bra001415.1
EnsemblPlants:Bra001415.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016209	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454
GO:GO:0051920	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	UniProt:M4CB36	PFAM:PF00578
PFAM:PF10417	PFscan:PS51352	PANTHER:PTHR10681	PANTHER:PTHR10681:SF140	InterPro:Peroxiredoxin_C	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0002540723	SEG:seg	:	:

Description

AT3G11630 (E=8e-106) | 2-cys peroxiredoxin, chloroplast (BAS1)

Coordinates

chrA03:+:16269003..16270654

Molecular Weight (calculated)

34187.2 Da

IEP (calculated)

9.313

GRAVY (calculated)

-0.071

Length

307 amino acids

Sequence
(BLAST)

001: MASVASSTTL ISSSASVLPA TKSSLLPSPS LSFLPTLSSP SPSASLRLAR PSPLTSIRSS SRRSFAVKAQ TGCWVCVDLT KSPELYQNLV HRVVRMIFHW
101: LETRRLILRQ RLGSIRRNKA PDFEAEAVFD QEFIKVKLSE YIGKKYVILF FYPLDFTFVC PTEITAFSDR YAEFEKLNTE VLGVSVDSVF SHLAWVQTDR
201: KSGGLGDLNY PLISDVTKSI SKSFGVLIHD QGIALRGLFI IDKEGVIQHS TINNLGIGRS VDETMRTLQA LQYIQENPDE VCPAGWKPGE KSMKPDPKLS
301: KEYFSAI

Best Arabidopsis Sequence Match ( AT3G11630.1 )
(BLAST)

001: MASVASSTTL ISSPSSRVFP AKSSLSSPSV SFLRTLSSPS ASASLRSGFA RRSSLSSTSR RSFAVKAQAD DLPLVGNKAP DFEAEAVFDQ EFIKVKLSDY
101: IGKKYVILFF YPLDFTFVCP TEITAFSDRH SEFEKLNTEV LGVSVDSVFS HLAWVQTDRK SGGLGDLNYP LISDVTKSIS KSFGVLIHDQ GIALRGLFII
201: DKEGVIQHST INNLGIGRSV DETMRTLQAL QYIQENPDEV CPAGWKPGEK SMKPDPKLSK EYFSAI

Arabidopsis Description

BAS12-Cys peroxiredoxin BAS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96291]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.