Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
VIT_08s0007g02490.t01 | |
VIT_08s0007g08760.t01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G11630.1 | VIT_08s0007g08760.t01 | AT2G41680.1 | 25448674 |
AT5G06290.1 | VIT_08s0007g08760.t01 | AT2G41680.1 | 25448674 |
AT5G06290.1 | VIT_08s0007g02490.t01 | AT3G11630.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY67317 | Canola | endoplasmic reticulum | 50.92 | 88.53 |
CDY67795 | Canola | cytosol | 69.6 | 77.24 |
CDY08508 | Canola | plastid | 72.16 | 75.48 |
Bra034824.1-P | Field mustard | plastid | 71.79 | 75.1 |
KRH32817 | Soybean | nucleus, plastid | 70.7 | 74.81 |
CDY01041 | Canola | plastid | 71.06 | 74.62 |
Os02t0537700-01 | Rice | extracellular | 71.06 | 74.33 |
KRH72215 | Soybean | nucleus | 70.7 | 74.23 |
Solyc01g007740.2.1 | Tomato | plastid | 72.16 | 73.78 |
Bra009181.1-P | Field mustard | plastid | 72.53 | 73.61 |
Bra038667.1-P | Field mustard | plastid | 60.44 | 73.33 |
EES06920 | Sorghum | plastid | 69.6 | 73.08 |
Zm00001d050666_P001 | Maize | plastid | 69.6 | 73.08 |
CDX73860 | Canola | plastid | 71.43 | 72.76 |
AT3G11630.1 | Thale cress | plastid | 70.7 | 72.56 |
Zm00001d016736_P001 | Maize | extracellular, mitochondrion, plastid | 68.86 | 72.31 |
TraesCS2D01G295500.2 | Wheat | plastid | 67.77 | 71.71 |
TraesCS2A01G297500.1 | Wheat | plastid | 67.77 | 71.71 |
TraesCS2B01G313700.1 | Wheat | golgi, plastid | 68.13 | 70.99 |
PGSC0003DMT400042222 | Potato | plastid | 70.7 | 70.96 |
HORVU2Hr1G073760.2 | Barley | plastid | 67.77 | 70.61 |
Solyc10g082030.1.1 | Tomato | plastid | 68.86 | 70.41 |
PGSC0003DMT400072569 | Potato | cytosol, extracellular, plastid | 68.86 | 70.41 |
AT5G06290.1 | Thale cress | plastid | 70.33 | 70.33 |
CDY56598 | Canola | cytosol | 68.5 | 67.51 |
CDX73858 | Canola | plastid | 71.79 | 65.55 |
Bra001415.1-P | Field mustard | plastid | 69.23 | 61.56 |
KRG96244 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 49.45 | 61.36 |
GSMUA_Achr3P02980_001 | Banana | cytosol | 40.29 | 44.9 |
KRH04627 | Soybean | extracellular | 19.41 | 42.74 |
VIT_05s0020g00600.t01 | Wine grape | cytosol | 22.71 | 28.31 |
VIT_05s0020g00590.t01 | Wine grape | cytosol | 14.65 | 23.67 |
VIT_05s0077g00050.t01 | Wine grape | cytosol | 16.12 | 23.04 |
Protein Annotations
KEGG:00480+1.11.1.15 | MapMan:10.5.3.1 | EntrezGene:100259748 | wikigene:100259748 | Gene3D:3.40.30.10 | ProteinID:AEL16458 |
ProteinID:AEL16458.1 | EMBL:AM443534 | InterPro:AhpC/TSA | ProteinID:CAN67408 | ProteinID:CAN67408.1 | ProteinID:CBI30370 |
ProteinID:CBI30370.3 | UniProt:D7TH54 | EMBL:FN595991 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 |
GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016209 |
GO:GO:0016491 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0051920 | GO:GO:0055114 | GO:GO:0098869 |
InterPro:IPR013766 | EMBL:JN392719 | EntrezGene:LOC100259748 | wikigene:LOC100259748 | PFAM:PF00578 | PFAM:PF10417 |
PIRSF:PIRSF000239 | PFscan:PS51352 | PANTHER:PTHR10681 | PANTHER:PTHR10681:SF140 | InterPro:Peroxiredoxin_AhpC-typ | InterPro:Peroxiredoxin_C |
SUPFAM:SSF52833 | TIGR:TC55031 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00015C9BC8 | ArrayExpress:VIT_08s0007g02490 |
EnsemblPlantsGene:VIT_08s0007g02490 | EnsemblPlants:VIT_08s0007g02490.t01 | unigene:Vvi.6796 | RefSeq:XP_010653738.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr8:-:16609697..16615645
Molecular Weight (calculated)
30176.0 Da
IEP (calculated)
7.433
GRAVY (calculated)
-0.182
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MACSAPSTPT TLLSSNPRAF PSKSLSTVAS FSKPLSPQTL TIPNSFNPLR KPFQSPVPRS ISSRGSHSRR SLVVRASEAP LVGNKAPDFE AEAVFDQEFI
101: KVTLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEILGV SIDSVFSHLA WVQTDRKSGG LGDLKYPLVS DVTKSISKSY DVLIPDQGVA
201: LRGLFIIDKE GIIQHATINN LAIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF AAI
101: KVTLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEILGV SIDSVFSHLA WVQTDRKSGG LGDLKYPLVS DVTKSISKSY DVLIPDQGVA
201: LRGLFIIDKE GIIQHATINN LAIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF AAI
001: MSMASIASSS STTLLSSSRV LLPSKSSLLS PTVSFPRIIP SSSASSSSLC SGFSSLGSLT TNRSASRRNF AVKAQADDLP LVGNKAPDFE AEAVFDQEFI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF SAI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF SAI
Arabidopsis Description
2-Cys Prx B2-Cys peroxiredoxin BAS1-like, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5R8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.