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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 11
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67317 Canola endoplasmic reticulum 50.92 88.53
CDY67795 Canola cytosol 69.6 77.24
CDY08508 Canola plastid 72.16 75.48
Bra034824.1-P Field mustard plastid 71.79 75.1
KRH32817 Soybean nucleus, plastid 70.7 74.81
CDY01041 Canola plastid 71.06 74.62
Os02t0537700-01 Rice extracellular 71.06 74.33
KRH72215 Soybean nucleus 70.7 74.23
Solyc01g007740.2.1 Tomato plastid 72.16 73.78
Bra009181.1-P Field mustard plastid 72.53 73.61
Bra038667.1-P Field mustard plastid 60.44 73.33
EES06920 Sorghum plastid 69.6 73.08
Zm00001d050666_P001 Maize plastid 69.6 73.08
CDX73860 Canola plastid 71.43 72.76
AT3G11630.1 Thale cress plastid 70.7 72.56
Zm00001d016736_P001 Maize extracellular, mitochondrion, plastid 68.86 72.31
TraesCS2D01G295500.2 Wheat plastid 67.77 71.71
TraesCS2A01G297500.1 Wheat plastid 67.77 71.71
TraesCS2B01G313700.1 Wheat golgi, plastid 68.13 70.99
PGSC0003DMT400042222 Potato plastid 70.7 70.96
HORVU2Hr1G073760.2 Barley plastid 67.77 70.61
Solyc10g082030.1.1 Tomato plastid 68.86 70.41
PGSC0003DMT400072569 Potato cytosol, extracellular, plastid 68.86 70.41
AT5G06290.1 Thale cress plastid 70.33 70.33
CDY56598 Canola cytosol 68.5 67.51
CDX73858 Canola plastid 71.79 65.55
Bra001415.1-P Field mustard plastid 69.23 61.56
KRG96244 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 49.45 61.36
GSMUA_Achr3P02980_001 Banana cytosol 40.29 44.9
KRH04627 Soybean extracellular 19.41 42.74
VIT_05s0020g00600.t01 Wine grape cytosol 22.71 28.31
VIT_05s0020g00590.t01 Wine grape cytosol 14.65 23.67
VIT_05s0077g00050.t01 Wine grape cytosol 16.12 23.04
Protein Annotations
KEGG:00480+1.11.1.15MapMan:10.5.3.1EntrezGene:100259748wikigene:100259748Gene3D:3.40.30.10ProteinID:AEL16458
ProteinID:AEL16458.1EMBL:AM443534InterPro:AhpC/TSAProteinID:CAN67408ProteinID:CAN67408.1ProteinID:CBI30370
ProteinID:CBI30370.3UniProt:D7TH54EMBL:FN595991GO:GO:0003674GO:GO:0003824GO:GO:0004601
GO:GO:0005575GO:GO:0005623GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016209
GO:GO:0016491GO:GO:0019725GO:GO:0045454GO:GO:0051920GO:GO:0055114GO:GO:0098869
InterPro:IPR013766EMBL:JN392719EntrezGene:LOC100259748wikigene:LOC100259748PFAM:PF00578PFAM:PF10417
PIRSF:PIRSF000239PFscan:PS51352PANTHER:PTHR10681PANTHER:PTHR10681:SF140InterPro:Peroxiredoxin_AhpC-typInterPro:Peroxiredoxin_C
SUPFAM:SSF52833TIGR:TC55031InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI00015C9BC8ArrayExpress:VIT_08s0007g02490
EnsemblPlantsGene:VIT_08s0007g02490EnsemblPlants:VIT_08s0007g02490.t01unigene:Vvi.6796RefSeq:XP_010653738.1SEG:seg:
Description
No Description!
Coordinates
chr8:-:16609697..16615645
Molecular Weight (calculated)
30176.0 Da
IEP (calculated)
7.433
GRAVY (calculated)
-0.182
Length
273 amino acids
Sequence
(BLAST)
001: MACSAPSTPT TLLSSNPRAF PSKSLSTVAS FSKPLSPQTL TIPNSFNPLR KPFQSPVPRS ISSRGSHSRR SLVVRASEAP LVGNKAPDFE AEAVFDQEFI
101: KVTLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEILGV SIDSVFSHLA WVQTDRKSGG LGDLKYPLVS DVTKSISKSY DVLIPDQGVA
201: LRGLFIIDKE GIIQHATINN LAIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF AAI
Best Arabidopsis Sequence Match ( AT5G06290.1 )
(BLAST)
001: MSMASIASSS STTLLSSSRV LLPSKSSLLS PTVSFPRIIP SSSASSSSLC SGFSSLGSLT TNRSASRRNF AVKAQADDLP LVGNKAPDFE AEAVFDQEFI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF SAI
Arabidopsis Description
2-Cys Prx B2-Cys peroxiredoxin BAS1-like, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5R8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.