Factsheet for HORVU2Hr1G073760.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 16758444

msms PMID: 16758444 doi

B Granvogl, V Reisinger, LA Eichacker

Department für Biologie I, Ludwig-Maximilians-Universität, München, Germany.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G023170.1
HORVU2Hr1G073760.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11630.1	HORVU2Hr1G023170.1	AT2G41680.1	25448674
AT5G06290.1	HORVU2Hr1G023170.1	AT2G41680.1	25448674
AT5G06290.1	HORVU2Hr1G073760.2	AT3G11630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G313700.1	Wheat	golgi, plastid	96.95	96.95
TraesCS2D01G295500.2	Wheat	plastid	93.51	94.96
TraesCS2A01G297500.1	Wheat	plastid	93.51	94.96
CDY67317	Canola	endoplasmic reticulum	54.58	91.08
Os02t0537700-01	Rice	extracellular	76.72	77.01
Zm00001d050666_P001	Maize	plastid	76.34	76.92
CDY67795	Canola	cytosol	72.14	76.83
EES06920	Sorghum	plastid	75.95	76.54
Zm00001d016736_P001	Maize	extracellular, mitochondrion, plastid	75.57	76.15
Solyc10g082030.1.1	Tomato	plastid	75.95	74.53
PGSC0003DMT400072569	Potato	cytosol, extracellular, plastid	75.57	74.16
AT3G11630.1	Thale cress	plastid	73.28	72.18
Bra009181.1-P	Field mustard	plastid	74.05	72.12
CDY01041	Canola	plastid	71.37	71.92
CDY08508	Canola	plastid	71.37	71.65
Bra034824.1-P	Field mustard	plastid	71.37	71.65
AT5G06290.1	Thale cress	plastid	74.05	71.06
Solyc01g007740.2.1	Tomato	plastid	72.14	70.79
PGSC0003DMT400042222	Potato	plastid	73.28	70.59
CDX73860	Canola	plastid	71.76	70.15
Bra038667.1-P	Field mustard	plastid	58.78	68.44
VIT_08s0007g02490.t01	Wine grape	plastid	70.61	67.77
CDY56598	Canola	cytosol	70.99	67.15
KRH67987	Soybean	endoplasmic reticulum	48.85	65.98
CDX73858	Canola	plastid	73.28	64.21
Bra001415.1-P	Field mustard	plastid	69.85	59.61
HORVU2Hr1G026810.1	Barley	cytosol	20.61	24.77

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.5.3.1	Gene3D:3.40.30.10	EMBL:AK367302	InterPro:AhpC/TSA	UniProt:F2DTT4
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016209	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0051920
GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:HORVU2Hr1G073760	EnsemblPlants:HORVU2Hr1G073760.2	InterPro:IPR013766	PFAM:PF00578
PFAM:PF10417	PIRSF:PIRSF000239	PFscan:PS51352	PANTHER:PTHR10681	PANTHER:PTHR10681:SF140	InterPro:Peroxiredoxin_AhpC-typ
InterPro:Peroxiredoxin_C	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001D62DB3	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DTT4]

Coordinates

chrchr2H:-:532288077..532292322

Molecular Weight (calculated)

28231.7 Da

IEP (calculated)

6.774

GRAVY (calculated)

0.000

Length

262 amino acids

Sequence
(BLAST)

001: MACAISASTV STAAALVASP KTSGAPQCLS FPRAFGGAAA RPARLAAAGS RTARARSFVA RAAAEYDLPL VGNKAPDFAA EAVFDQEFIN VKLSDYIGKK
101: YVILFFYPLD FTFVCPTEIT AFSDRHEEFE KINTEILGVS VDSVFSHLAW VQTERKSGGL GDLKYPLVSD VTKSISKSFG VLIPDQGIAL RGLFIIDKEG
201: VIQHSTINNL GIGRSVDETL RTLQALQYVQ ENPDEVCPAG WKPGEKSMKP DPKGSKEYFA AI

Best Arabidopsis Sequence Match ( AT5G06290.1 )
(BLAST)

001: MSMASIASSS STTLLSSSRV LLPSKSSLLS PTVSFPRIIP SSSASSSSLC SGFSSLGSLT TNRSASRRNF AVKAQADDLP LVGNKAPDFE AEAVFDQEFI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF SAI

Arabidopsis Description

2-Cys Prx B2-Cys peroxiredoxin BAS1-like, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5R8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.