Factsheet for HORVU2Hr1G026810.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G154300.2	Wheat	cytosol, plastid	78.9	78.9
TraesCS2B01G174400.1	Wheat	cytosol	78.44	78.44
Os07t0638300-01	Rice	plastid	70.18	69.55
EER97619	Sorghum	cytosol	70.18	68.92
CDY13290	Canola	cytosol	24.31	68.83
Zm00001d022278_P001	Maize	cytosol	68.35	65.07
VIT_05s0020g00600.t01	Wine grape	cytosol	61.01	60.73
Os07t0638400-01	Rice	cytosol	61.01	60.45
Solyc03g096040.2.1	Tomato	extracellular	60.55	60.27
PGSC0003DMT400071283	Potato	cytosol	60.09	60.09
KRH42408	Soybean	endoplasmic reticulum	58.72	58.72
AT1G48130.1	Thale cress	cytosol	56.88	57.41
Bra038102.1-P	Field mustard	cytosol	56.42	56.94
GSMUA_Achr11P...	Banana	cytosol	64.22	56.0
KRH58527	Soybean	cytosol, endoplasmic reticulum, mitochondrion	43.58	53.98
Bra032241.1-P	Field mustard	cytosol	56.42	53.25
CDY72143	Canola	cytosol	29.36	50.39
CDY72482	Canola	cytosol	21.1	43.81
VIT_05s0020g00590.t01	Wine grape	cytosol	32.11	41.42
VIT_05s0077g00050.t01	Wine grape	cytosol	35.32	40.31
HORVU2Hr1G073760.2	Barley	plastid	24.77	20.61

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.1	Gene3D:3.30.1020.10	Gene3D:3.40.30.10	InterPro:AhpC/TSA	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016209
GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0051920	GO:GO:0055114	GO:GO:0098869
EnsemblPlantsGene:HORVU2Hr1G026810	EnsemblPlants:HORVU2Hr1G026810.1	InterPro:IPR013766	PFAM:PF00578	PFAM:PF10417	PIRSF:PIRSF000239
PFscan:PS51352	PANTHER:PTHR43503	PANTHER:PTHR43503:SF4	InterPro:Peroxiredoxin_AhpC-typ	InterPro:Peroxiredoxin_C	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:86326178..86327145

Molecular Weight (calculated)

20387.3 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.333

Length

218 amino acids

Sequence
(BLAST)

001: MPGLTIGDTV PNLELDSTHG KIRIHDYVGN GYVILFSHPG DFTPVCTTEL AAMANYAKEF EKRGVKLLGI SCDDVQSHKE WTKDIEAYKP GSKVTYPIMA
101: DPDRSAIKQL NMVDPDEKDA QGQLPSRTLH IVGPDKVVKL SFLYPSCTGR NMDEVVRAVD SLLTAAKHKV ATPANWKPXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XQHTVPSE

Best Arabidopsis Sequence Match ( AT1G48130.1 )
(BLAST)

001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS

Arabidopsis Description

PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.