CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72143	Canola	cytosol	92.38	76.38
GSMUA_Achr2P03480_001	Banana	cytosol	60.0	58.33
Bra038102.1-P	Field mustard	cytosol	92.38	44.91
AT1G48130.1	Thale cress	cytosol	83.81	40.74
TraesCS2D01G154300.2	Wheat	cytosol, plastid	71.43	34.4
TraesCS2B01G174400.1	Wheat	cytosol	70.48	33.95
Solyc03g096040.2.1	Tomato	extracellular	69.52	33.33
VIT_05s0077g00050.t01	Wine grape	cytosol	60.0	32.98
VIT_05s0020g00600.t01	Wine grape	cytosol	68.57	32.88
PGSC0003DMT400071283	Potato	cytosol	67.62	32.57
Zm00001d022278_P001	Maize	cytosol	70.48	32.31
Os07t0638300-01	Rice	plastid	67.62	32.27
EER97619	Sorghum	cytosol	67.62	31.98
Os07t0638400-01	Rice	cytosol	64.76	30.91
KRH42408	Soybean	endoplasmic reticulum	63.81	30.73
VIT_05s0020g00590.t01	Wine grape	cytosol	43.81	27.22
KRH58527	Soybean	cytosol, endoplasmic reticulum, mitochondrion	43.81	26.14
GSMUA_Achr11P...	Banana	cytosol	58.1	24.4
HORVU2Hr1G026810.1	Barley	cytosol	43.81	21.1
CDY67317	Canola	endoplasmic reticulum	20.0	13.38
CDY67795	Canola	cytosol	20.0	8.54
CDX73860	Canola	plastid	20.0	7.84
CDY01041	Canola	plastid	19.05	7.69
CDY08508	Canola	plastid	19.05	7.66
CDY56598	Canola	cytosol	20.0	7.58
CDX73858	Canola	plastid	20.0	7.02
CDY13290	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.1	Gene3D:3.30.1020.10	GO:A0A078K3K4	UniProt:A0A078K3K4	EnsemblPlants:CDY72482
ProteinID:CDY72482	ProteinID:CDY72482.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0051920	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00030053001	PFAM:PF10417
PANTHER:PTHR43503	PANTHER:PTHR43503:SF4	InterPro:Peroxiredoxin_C	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EDFCD2

Description

BnaCnng77870DBnaCnng77870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K3K4]

Coordinates

chrLK051308:+:53..642

Molecular Weight (calculated)

11578.1 Da

IEP (calculated)

9.128

GRAVY (calculated)

-0.291

Length

105 amino acids

Sequence
(BLAST)

001: MIDPIENGPS RALHIVGPDC KIKLSFLYPS TTGRNMDEVL RAFDSLLMAA KHKNKIATPV NWKPDEPVVI SPAVSDEEAK KLFPQGFKTA ELPSKKGYLR
101: VADVS

Best Arabidopsis Sequence Match ( AT1G48130.1 )
(BLAST)

001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS

Arabidopsis Description

PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.