Factsheet for Os07t0638400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0638300-01	Rice	plastid	79.55	79.55
TraesCS2D01G154300.2	Wheat	cytosol, plastid	73.64	74.31
TraesCS2B01G174400.1	Wheat	cytosol	72.73	73.39
EER97619	Sorghum	cytosol	73.64	72.97
Zm00001d022278_P001	Maize	cytosol	73.64	70.74
VIT_05s0020g00600.t01	Wine grape	cytosol	68.64	68.95
Solyc03g096040.2.1	Tomato	extracellular	67.27	67.58
PGSC0003DMT400071283	Potato	cytosol	66.82	67.43
AT1G48130.1	Thale cress	cytosol	65.45	66.67
Bra038102.1-P	Field mustard	cytosol	64.09	65.28
KRH42408	Soybean	endoplasmic reticulum	64.55	65.14
CDY72482	Canola	cytosol	30.91	64.76
CDY72143	Canola	cytosol	37.27	64.57
CDY13290	Canola	cytosol	22.27	63.64
KRH58527	Soybean	cytosol, endoplasmic reticulum, mitochondrion	50.45	63.07
HORVU2Hr1G026810.1	Barley	cytosol	60.45	61.01
Bra032241.1-P	Field mustard	cytosol	63.64	60.61
GSMUA_Achr11P...	Banana	cytosol	67.27	59.2
VIT_05s0077g00050.t01	Wine grape	cytosol	45.0	51.83
VIT_05s0020g00590.t01	Wine grape	cytosol	35.91	46.75
Os02t0537700-01	Rice	extracellular	24.09	20.31

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.1	Gene3D:3.30.1020.10	Gene3D:3.40.30.10	EntrezGene:4344046	EMBL:AK073273
EMBL:AK104089	InterPro:AhpC/TSA	ProteinID:BAC45198.1	ProteinID:BAF22322.1	ProteinID:BAT02839.1	ProteinID:EAZ40815.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016209
GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0051920	GO:GO:0055114	GO:GO:0098869
InterPro:IPR013766	EnsemblPlantsGene:Os07g0638400	EnsemblPlants:Os07t0638400-01	UniProt:P0C5D1	PFAM:PF00578	PFAM:PF10417
PIRSF:PIRSF000239	PFscan:PS51352	PANTHER:PTHR43503	PANTHER:PTHR43503:SF4	InterPro:Peroxiredoxin_AhpC-typ	InterPro:Peroxiredoxin_C
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00000AE0D7	RefSeq:XP_015645187.1	SEG:seg

Description

Similar to 1-Cys peroxiredoxin. (Os07t0638400-01)

Coordinates

chr7:+:26551676..26552939

Molecular Weight (calculated)

24233.9 Da

IEP (calculated)

5.362

GRAVY (calculated)

-0.267

Length

220 amino acids

Sequence
(BLAST)

001: MPGLTLGDVV PDLELDTTHG KIRLHDFVGD AYVIIFSHPA DFTPVCTTEL SEMAGYAGEF DKRGVKLLGF SCDDVESHKD WIKDIEAYKP GRRVGFPIVA
101: DPDREAIRQL NMIDADEKDT AGGELPNRAL HIVGPDKKVK LSFLFPACTG RNMAEVLRAT DALLTAARHR VATPVNWKPG ERVVIPPGVS DEEAKARFPA
201: GFETAQLPSN KCYLRFTQVD

Best Arabidopsis Sequence Match ( AT1G48130.1 )
(BLAST)

001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS

Arabidopsis Description

PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.