Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13290 | Canola | cytosol | 32.41 | 90.91 |
| Bra038102.1-P | Field mustard | cytosol | 90.74 | 90.74 |
| CDY72143 | Canola | cytosol | 53.24 | 90.55 |
| CDY72482 | Canola | cytosol | 40.74 | 83.81 |
| Bra032241.1-P | Field mustard | cytosol | 89.35 | 83.55 |
| VIT_05s0020g00600.t01 | Wine grape | cytosol | 73.15 | 72.15 |
| TraesCS2B01G174400.1 | Wheat | cytosol | 72.69 | 72.02 |
| KRH58527 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 58.33 | 71.59 |
| Solyc03g096040.2.1 | Tomato | extracellular | 72.22 | 71.23 |
| TraesCS2D01G154300.2 | Wheat | cytosol, plastid | 71.76 | 71.1 |
| KRH42408 | Soybean | endoplasmic reticulum | 71.3 | 70.64 |
| PGSC0003DMT400071283 | Potato | cytosol | 70.37 | 69.72 |
| Os07t0638300-01 | Rice | plastid | 69.91 | 68.64 |
| EER97619 | Sorghum | cytosol | 67.59 | 65.77 |
| Os07t0638400-01 | Rice | cytosol | 66.67 | 65.45 |
| Zm00001d022278_P001 | Maize | cytosol | 67.13 | 63.32 |
| GSMUA_Achr2P03480_001 | Banana | cytosol | 28.7 | 57.41 |
| HORVU2Hr1G026810.1 | Barley | cytosol | 57.41 | 56.88 |
| GSMUA_Achr11P... | Banana | cytosol | 62.96 | 54.4 |
| VIT_05s0077g00050.t01 | Wine grape | cytosol | 46.76 | 52.88 |
| VIT_05s0020g00590.t01 | Wine grape | cytosol | 36.11 | 46.15 |
| AT3G11630.1 | Thale cress | plastid | 26.39 | 21.43 |
| AT5G06290.1 | Thale cress | plastid | 25.93 | 20.51 |
Protein Annotations
| KEGG:00480+1.11.1.15 | MapMan:10.4.3.1 | Gene3D:3.30.1020.10 | Gene3D:3.40.30.10 | EntrezGene:841231 | UniProt:A0A178W968 |
| ProteinID:AAF79536.1 | ProteinID:AEE32252.1 | ArrayExpress:AT1G48130 | EnsemblPlantsGene:AT1G48130 | RefSeq:AT1G48130 | TAIR:AT1G48130 |
| RefSeq:AT1G48130-TAIR-G | EnsemblPlants:AT1G48130.1 | TAIR:AT1G48130.1 | Symbol:ATPER1 | InterPro:AhpC/TSA | Unigene:At.38476 |
| EMBL:BT003916 | EMBL:BT014873 | ProteinID:CAA72804.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004601 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008379 | GO:GO:0009269 |
| GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010231 | GO:GO:0016209 | GO:GO:0016491 |
| GO:GO:0019725 | GO:GO:0045454 | GO:GO:0051920 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 |
| RefSeq:NP_175247.1 | UniProt:O04005 | ProteinID:OAP14999.1 | PFAM:PF00578 | PFAM:PF10417 | PIRSF:PIRSF000239 |
| PO:PO:0001170 | PO:PO:0005360 | PO:PO:0009009 | PO:PO:0009010 | PFscan:PS51352 | PANTHER:PTHR43503 |
| PANTHER:PTHR43503:SF4 | InterPro:Peroxiredoxin_AhpC-typ | InterPro:Peroxiredoxin_C | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| UniParc:UPI000004C595 | EMBL:Z37278 | : | : | : | : |
Description
PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
Coordinates
chr1:+:17780429..17781727
Molecular Weight (calculated)
24082.8 Da
IEP (calculated)
6.603
GRAVY (calculated)
-0.405
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.