Factsheet for Os07t0638300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 19038476
nucleus: 26035336
plastid: 27126603
plastid: 27992503

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

msms PMID: 27126603 doi

Y Wang, K Ji, S Shen, H Chen

Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China. Electronic address: chenh@ibcas.ac.cn., Key Laboratory of Research and Development for Resource Plant, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G154300.2	Wheat	cytosol, plastid	84.09	84.86
TraesCS2B01G174400.1	Wheat	cytosol	83.64	84.4
Os07t0638400-01	Rice	cytosol	79.55	79.55
EER97619	Sorghum	cytosol	80.0	79.28
Solyc03g096040.2.1	Tomato	extracellular	75.91	76.26
PGSC0003DMT400071283	Potato	cytosol	75.0	75.69
Zm00001d022278_P001	Maize	cytosol	78.64	75.55
VIT_05s0020g00600.t01	Wine grape	cytosol	72.27	72.6
KRH42408	Soybean	endoplasmic reticulum	70.0	70.64
HORVU2Hr1G026810.1	Barley	cytosol	69.55	70.18
AT1G48130.1	Thale cress	cytosol	68.64	69.91
CDY72143	Canola	cytosol	39.55	68.5
Bra038102.1-P	Field mustard	cytosol	66.82	68.06
CDY72482	Canola	cytosol	32.27	67.62
KRH58527	Soybean	cytosol, endoplasmic reticulum, mitochondrion	54.09	67.61
CDY13290	Canola	cytosol	23.64	67.53
Bra032241.1-P	Field mustard	cytosol	67.27	64.07
GSMUA_Achr11P...	Banana	cytosol	69.09	60.8
VIT_05s0077g00050.t01	Wine grape	cytosol	47.27	54.45
VIT_05s0020g00590.t01	Wine grape	cytosol	38.18	49.7
Os02t0537700-01	Rice	extracellular	26.36	22.22

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.1	Gene3D:3.30.1020.10	Gene3D:3.40.30.10	EntrezGene:4344045	EMBL:AK101401
EMBL:AY336994	InterPro:AhpC/TSA	UniProt:B7ERQ1	ProteinID:BAC45197.1	ProteinID:BAF22321.1	ProteinID:BAT02838.1
EMBL:CM000144	EMBL:D63917	ProteinID:EEE67667.1	EMBL:EU267997	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016209	GO:GO:0016491	GO:GO:0019725
GO:GO:0045454	GO:GO:0051920	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	EnsemblPlantsGene:Os07g0638300
EnsemblPlants:Os07t0638300-01	UniProt:P0C5C9	PFAM:PF00578	PFAM:PF10417	PIRSF:PIRSF000239	PFscan:PS51352
PANTHER:PTHR43503	PANTHER:PTHR43503:SF4	InterPro:Peroxiredoxin_AhpC-typ	InterPro:Peroxiredoxin_C	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI00000AE0D6	RefSeq:XP_015645300.1	:	:	:

Description

Similar to 1-Cys peroxiredoxin. (Os07t0638300-01)

Coordinates

chr7:+:26548836..26550044

Molecular Weight (calculated)

24043.7 Da

IEP (calculated)

6.397

GRAVY (calculated)

-0.350

Length

220 amino acids

Sequence
(BLAST)

001: MPGLTIGDTV PNLELDSTHG KIRIHDFVGD TYVILFSHPG DFTPVCTTEL AAMAGYAKEF DKRGVKLLGI SCDDVQSHKD WIKDIEAYKP GNRVTYPIMA
101: DPSREAIKQL NMVDPDEKDS NGGHLPSRAL HIVGPDKKVK LSFLYPACVG RNMDEVVRAV DALQTAAKHA VATPVNWKPG ERVVIPPGVS DDEAKEKFPQ
201: GFDTADLPSG KGYLRFTKVG

Best Arabidopsis Sequence Match ( AT1G48130.1 )
(BLAST)

001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS

Arabidopsis Description

PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.