Factsheet for GSMUA_Achr11P20890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g00600.t01	Wine grape	cytosol	62.0	70.78
PGSC0003DMT400071283	Potato	cytosol	61.6	70.64
TraesCS2D01G154300.2	Wheat	cytosol, plastid	61.2	70.18
Solyc03g096040.2.1	Tomato	extracellular	61.2	69.86
EER97619	Sorghum	cytosol	62.0	69.82
Os07t0638300-01	Rice	plastid	60.8	69.09
KRH42408	Soybean	endoplasmic reticulum	60.0	68.81
TraesCS2B01G174400.1	Wheat	cytosol	59.2	67.89
KRH58527	Soybean	cytosol, endoplasmic reticulum, mitochondrion	47.6	67.61
CDY13290	Canola	cytosol	20.8	67.53
Os07t0638400-01	Rice	cytosol	59.2	67.27
Zm00001d022278_P001	Maize	cytosol	60.4	65.94
HORVU2Hr1G026810.1	Barley	cytosol	56.0	64.22
Bra038102.1-P	Field mustard	cytosol	55.2	63.89
AT1G48130.1	Thale cress	cytosol	54.4	62.96
CDY72143	Canola	cytosol	31.6	62.2
Bra032241.1-P	Field mustard	cytosol	55.2	59.74
CDY72482	Canola	cytosol	24.4	58.1
GSMUA_Achr2P03480_001	Banana	cytosol	24.8	57.41
VIT_05s0077g00050.t01	Wine grape	cytosol	40.0	52.36
VIT_05s0020g00590.t01	Wine grape	cytosol	32.8	48.52
GSMUA_Achr3P02970_001	Banana	cytosol	4.4	25.58
GSMUA_Achr2P20430_001	Banana	cytosol	4.4	25.58
GSMUA_Achr6P18200_001	Banana	plastid	22.0	20.6
GSMUA_Achr8P16140_001	Banana	plastid	22.0	20.45
GSMUA_Achr3P02980_001	Banana	cytosol	14.0	14.29

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.1	Gene3D:3.30.1020.10	Gene3D:3.40.30.10	InterPro:AhpC/TSA	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016209	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0051920	GO:GO:0055114
GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr11G20890_001	EnsemblPlants:GSMUA_Achr11P20890_001	EnsemblPlants:GSMUA_Achr11T20890_001	InterPro:IPR013766	UniProt:M0RU19
PFAM:PF00578	PFAM:PF10417	PFscan:PS51352	PANTHER:PTHR43503	PANTHER:PTHR43503:SF4	InterPro:Peroxiredoxin_C
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000296E1CC	:	:

Description

1-Cys peroxiredoxin [Source:GMGC_GENE;Acc:GSMUA_Achr11G20890_001]

Coordinates

chr11:-:21737954..21739471

Molecular Weight (calculated)

27706.1 Da

IEP (calculated)

5.620

GRAVY (calculated)

-0.355

Length

250 amino acids

Sequence
(BLAST)

001: MPGLTIGDTV ADLELETTQG KIRIHDYVGD GYCIVFSHPA DFTPVCTTEL GMMAKYAPEF EKRGVKLLGL SCDDVESHKE WIKDVEAYTP GSLVTYPIAA
101: DPKREVIKQL NMVDPDEEDA SGNQLPSRAL HVVGPDKKVK LSMLYPASTG RNMDEVLRVV DSLQKAAKHK VATPVNWKPG DPVVISPSVS NEEAKQIGDP
201: RRVIPYQRFT IISCIMNANH ELDLTSTFGN RARQAPYLTH LNDRDCLTVQ

Best Arabidopsis Sequence Match ( AT1G48130.1 )
(BLAST)

001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS

Arabidopsis Description

PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.