Factsheet for Zm00001d022278_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97619	Sorghum	cytosol	89.96	92.79
TraesCS2D01G154300.2	Wheat	cytosol, plastid	79.91	83.94
TraesCS2B01G174400.1	Wheat	cytosol	79.91	83.94
Os07t0638300-01	Rice	plastid	75.55	78.64
Os07t0638400-01	Rice	cytosol	70.74	73.64
Solyc03g096040.2.1	Tomato	extracellular	68.12	71.23
PGSC0003DMT400071283	Potato	cytosol	67.25	70.64
CDY72482	Canola	cytosol	32.31	70.48
VIT_05s0020g00600.t01	Wine grape	cytosol	66.38	69.41
CDY72143	Canola	cytosol	38.43	69.29
HORVU2Hr1G026810.1	Barley	cytosol	65.07	68.35
AT1G48130.1	Thale cress	cytosol	63.32	67.13
KRH42408	Soybean	endoplasmic reticulum	63.76	66.97
Bra038102.1-P	Field mustard	cytosol	62.01	65.74
CDY13290	Canola	cytosol	21.83	64.94
KRH58527	Soybean	cytosol, endoplasmic reticulum, mitochondrion	49.78	64.77
Bra032241.1-P	Field mustard	cytosol	62.01	61.47
GSMUA_Achr11P...	Banana	cytosol	65.94	60.4
VIT_05s0077g00050.t01	Wine grape	cytosol	41.92	50.26
VIT_05s0020g00590.t01	Wine grape	cytosol	34.06	46.15
Zm00001d050666_P001	Maize	plastid	23.58	20.77
Zm00001d016736_P001	Maize	extracellular, mitochondrion, plastid	23.14	20.38

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.1	EntrezGene:100037830	Gene3D:3.30.1020.10	Gene3D:3.40.30.10	InterPro:AhpC/TSA
UniProt:B4FYU6	EMBL:BT042284	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016209	GO:GO:0016491
GO:GO:0019725	GO:GO:0045454	GO:GO:0050832	GO:GO:0051920	GO:GO:0055114	GO:GO:0098869
InterPro:IPR013766	ProteinID:ONM60035.1	PFAM:PF00578	PFAM:PF10417	PIRSF:PIRSF000239	PFscan:PS51352
PANTHER:PTHR43503	PANTHER:PTHR43503:SF4	InterPro:Peroxiredoxin_AhpC-typ	InterPro:Peroxiredoxin_C	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI00017B8200	EnsemblPlantsGene:Zm00001d022278	EnsemblPlants:Zm00001d022278_P001	EnsemblPlants:Zm00001d022278_T001	SEG:seg

Description

1-Cys peroxiredoxin PER1

Coordinates

chr7:+:174336203..174337471

Molecular Weight (calculated)

24972.8 Da

IEP (calculated)

6.881

GRAVY (calculated)

-0.397

Length

229 amino acids

Sequence
(BLAST)

001: MPGLTIGDTV PNLELDSTHG KIRIHDYVGD GYAIIFSHPA DFTPVCTTEM AAMAGYAKEF EKRGVKLLGI SCDDVESHRQ WTKDVEAYGG KQQQQQHTTT
101: KVTFPILADP ARDAIRQLNM VDPDEKDAAG RSMPSRALHV VGPDKAVKLS FLYPATTGRN MDEVLRAVDS LLTAAKHGGK VATPANWKPG ECAVIAPGVS
201: DEEARKMFPQ GFETADLPSK KGYLRFTKV

Best Arabidopsis Sequence Match ( AT1G48130.1 )
(BLAST)

001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS

Arabidopsis Description

PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.