Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G48130.1 | Thale cress | cytosol | 90.91 | 32.41 |
| KRH58527 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 72.73 | 31.82 |
| VIT_05s0020g00600.t01 | Wine grape | cytosol | 75.32 | 26.48 |
| KRH42408 | Soybean | endoplasmic reticulum | 72.73 | 25.69 |
| Solyc03g096040.2.1 | Tomato | extracellular | 71.43 | 25.11 |
| PGSC0003DMT400071283 | Potato | cytosol | 70.13 | 24.77 |
| TraesCS2D01G154300.2 | Wheat | cytosol, plastid | 68.83 | 24.31 |
| TraesCS2B01G174400.1 | Wheat | cytosol | 68.83 | 24.31 |
| HORVU2Hr1G026810.1 | Barley | cytosol | 68.83 | 24.31 |
| Os07t0638300-01 | Rice | plastid | 67.53 | 23.64 |
| EER97619 | Sorghum | cytosol | 64.94 | 22.52 |
| Os07t0638400-01 | Rice | cytosol | 63.64 | 22.27 |
| Zm00001d022278_P001 | Maize | cytosol | 64.94 | 21.83 |
| GSMUA_Achr11P... | Banana | cytosol | 67.53 | 20.8 |
| VIT_05s0077g00050.t01 | Wine grape | cytosol | 36.36 | 14.66 |
| VIT_05s0020g00590.t01 | Wine grape | cytosol | 29.87 | 13.61 |
| CDY67795 | Canola | cytosol | 32.47 | 10.16 |
| CDY01041 | Canola | plastid | 32.47 | 9.62 |
| CDY08508 | Canola | plastid | 32.47 | 9.58 |
| CDX73860 | Canola | plastid | 32.47 | 9.33 |
| CDY56598 | Canola | cytosol | 32.47 | 9.03 |
| CDX73858 | Canola | plastid | 32.47 | 8.36 |
| CDY67317 | Canola | endoplasmic reticulum | 16.88 | 8.28 |
| GSMUA_Achr2P03480_001 | Banana | cytosol | 1.3 | 0.93 |
| CDY72482 | Canola | cytosol | 0.0 | 0.0 |
| CDY72143 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+1.11.1.15 | Gene3D:3.40.30.10 | MapMan:50.1.11 | GO:A0A078FFW5 | UniProt:A0A078FFW5 | InterPro:AhpC/TSA |
| EnsemblPlants:CDY13290 | ProteinID:CDY13290 | ProteinID:CDY13290.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016209 | GO:GO:0016491 |
| GO:GO:0019725 | GO:GO:0045454 | GO:GO:0051920 | GO:GO:0055114 | GO:GO:0098869 | EnsemblPlantsGene:GSBRNA2T00071269001 |
| InterPro:IPR013766 | PFAM:PF00578 | PFscan:PS51352 | PANTHER:PTHR43503 | PANTHER:PTHR43503:SF4 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0004EEAF56 | : | : | : |
Description
BnaC06g14670DBnaC06g14670D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078FFW5]
Coordinates
chrLK032034:-:1..430
Molecular Weight (calculated)
8559.1 Da
IEP (calculated)
4.658
GRAVY (calculated)
-0.238
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MPGITLGDTV PNLEVETTHK NFKLHDYFAD SWTVLFSHPG DFTPVCTTEL GAMGKYAHEF EQRGVKLLGL SCDDIQS
001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS
Arabidopsis Description
PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.