Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72482 | Canola | cytosol | 58.33 | 60.0 |
| CDY72143 | Canola | cytosol | 57.41 | 48.82 |
| PGSC0003DMT400071283 | Potato | cytosol | 68.52 | 33.95 |
| Solyc03g096040.2.1 | Tomato | extracellular | 67.59 | 33.33 |
| VIT_05s0020g00600.t01 | Wine grape | cytosol | 64.81 | 31.96 |
| VIT_05s0077g00050.t01 | Wine grape | cytosol | 55.56 | 31.41 |
| KRH42408 | Soybean | endoplasmic reticulum | 60.19 | 29.82 |
| Bra038102.1-P | Field mustard | cytosol | 58.33 | 29.17 |
| AT1G48130.1 | Thale cress | cytosol | 57.41 | 28.7 |
| GSMUA_Achr3P02970_001 | Banana | cytosol | 11.11 | 27.91 |
| Bra032241.1-P | Field mustard | cytosol | 57.41 | 26.84 |
| VIT_05s0020g00590.t01 | Wine grape | cytosol | 41.67 | 26.63 |
| KRH58527 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 42.59 | 26.14 |
| GSMUA_Achr11P... | Banana | cytosol | 57.41 | 24.8 |
| GSMUA_Achr2P20430_001 | Banana | cytosol | 9.26 | 23.26 |
| GSMUA_Achr6P18200_001 | Banana | plastid | 25.0 | 10.11 |
| GSMUA_Achr8P16140_001 | Banana | plastid | 25.0 | 10.04 |
| GSMUA_Achr3P02980_001 | Banana | cytosol | 3.7 | 1.63 |
| CDY13290 | Canola | cytosol | 0.93 | 1.3 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P03480_001 | EnsemblPlants:GSMUA_Achr2T03480_001 | EnsemblPlantsGene:GSMUA_Achr2G03480_001 | Gene3D:3.30.1020.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0051920 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:Peroxiredoxin_C | InterPro:Thioredoxin-like_sf | KEGG:00480+1.11.1.15 | PANTHER:PTHR43503 | PANTHER:PTHR43503:SF4 | PFAM:PF10417 |
| SUPFAM:SSF52833 | UniParc:UPI000296FBFD | UniProt:M0S4T9 | MapMan:10.4.3.1 | : | : |
Description
1-Cys peroxiredoxin [Source:GMGC_GENE;Acc:GSMUA_Achr2G03480_001]
Coordinates
chr2:-:9168655..9168981
Molecular Weight (calculated)
11872.2 Da
IEP (calculated)
4.753
GRAVY (calculated)
-0.182
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDLNQKDAD GVEIPSRALH VIGPDKTIKL SFLYPAATGR NMDEVVRAVE SLQTTANFKV ATPVNWKPGE PVVISPSVSN EEAKVLFPQG YDTVDLPSKQ
101: QYLLFTNL
101: QYLLFTNL
001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS
Arabidopsis Description
PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.