Factsheet for GSMUA_Achr3P02980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96244	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.45	47.27
GSMUA_Achr8P16140_001	Banana	plastid	48.98	44.61
GSMUA_Achr6P18200_001	Banana	plastid	46.53	42.7
KRH72215	Soybean	nucleus	45.31	42.69
KRH32817	Soybean	nucleus, plastid	44.9	42.64
PGSC0003DMT400042222	Potato	plastid	45.71	41.18
Solyc01g007740.2.1	Tomato	plastid	44.49	40.82
PGSC0003DMT400072569	Potato	cytosol, extracellular, plastid	44.08	40.45
Solyc10g082030.1.1	Tomato	plastid	44.08	40.45
VIT_08s0007g02490.t01	Wine grape	plastid	44.9	40.29
KRH04627	Soybean	extracellular	14.29	28.23
GSMUA_Achr11P...	Banana	cytosol	14.29	14.0
GSMUA_Achr3P02970_001	Banana	cytosol	0.82	4.65
GSMUA_Achr2P03480_001	Banana	cytosol	1.63	3.7
GSMUA_Achr2P20430_001	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.5.3.1	Gene3D:3.40.30.10	InterPro:AhpC/TSA	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016209
GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr3G02980_001
EnsemblPlants:GSMUA_Achr3P02980_001	EnsemblPlants:GSMUA_Achr3T02980_001	InterPro:IPR013766	UniProt:M0SBB6	PFAM:PF00578	PIRSF:PIRSF000239
PFscan:PS51352	PANTHER:PTHR10681	PANTHER:PTHR10681:SF140	InterPro:Peroxiredoxin_AhpC-typ	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI0002954F82	SEG:seg	:	:	:

Description

2-Cys peroxiredoxin BAS1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G02980_001]

Coordinates

chr3:-:1948668..1953691

Molecular Weight (calculated)

27109.3 Da

IEP (calculated)

8.465

GRAVY (calculated)

-0.119

Length

245 amino acids

Sequence
(BLAST)

001: MEIQLEQNNL TVRHVSNRFD GSEFNFLERA LATCSDPSIV SLKASNPVAS LAPAPCPPSR APALPKGFLG LRASKGFRPL STRLASAKRS SSTSFCVKAA
101: FESDLPLVGN KAPDFEAEAV FDQEFINVRT LPSLDRSNSD YIGKKYVILF FYPLDFTFIC PTEITAFSDR YSDFGKLNTE ILGVSVDSVF SHLAWVQMDR
201: KSRGLGDLKY PLISDVTKSI SKYFGVLIPN QDIALRNCSS LTRKE

Best Arabidopsis Sequence Match ( AT5G06290.2 )
(BLAST)

001: MSMASIASSS STTLLSSSRV LLPSKSSLLS PTVSFPRIIP SSSASSSSLC SGFSSLGSLT TNRSASRRNF AVKAQADDLP LVGNKAPDFE AEAVFDQEFI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQVIKRK ITSLR

Arabidopsis Description

2-Cys Prx B2-Cys peroxiredoxin BAS1-like, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5R8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.