Factsheet for Bra032241.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038102.1-P	Field mustard	cytosol	91.34	97.69
CDY72143	Canola	cytosol	53.68	97.64
AT1G48130.1	Thale cress	cytosol	83.55	89.35
VIT_05s0020g00600.t01	Wine grape	cytosol	68.83	72.6
TraesCS2B01G174400.1	Wheat	cytosol	66.23	70.18
Solyc03g096040.2.1	Tomato	extracellular	66.23	69.86
TraesCS2D01G154300.2	Wheat	cytosol, plastid	65.37	69.27
KRH42408	Soybean	endoplasmic reticulum	64.94	68.81
PGSC0003DMT400071283	Potato	cytosol	64.5	68.35
KRH58527	Soybean	cytosol, endoplasmic reticulum, mitochondrion	51.95	68.18
Os07t0638300-01	Rice	plastid	64.07	67.27
EER97619	Sorghum	cytosol	61.47	63.96
Os07t0638400-01	Rice	cytosol	60.61	63.64
Zm00001d022278_P001	Maize	cytosol	61.47	62.01
GSMUA_Achr2P03480_001	Banana	cytosol	26.84	57.41
HORVU2Hr1G026810.1	Barley	cytosol	53.25	56.42
VIT_05s0077g00050.t01	Wine grape	cytosol	46.32	56.02
GSMUA_Achr11P...	Banana	cytosol	59.74	55.2
VIT_05s0020g00590.t01	Wine grape	cytosol	35.5	48.52
Bra009181.1-P	Field mustard	plastid	23.38	20.07
Bra038667.1-P	Field mustard	plastid	19.48	20.0
Bra034824.1-P	Field mustard	plastid	22.51	19.92
Bra001415.1-P	Field mustard	plastid	22.94	17.26

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.1	Gene3D:3.30.1020.10	Gene3D:3.40.30.10	InterPro:AhpC/TSA	EnsemblPlantsGene:Bra032241
EnsemblPlants:Bra032241.1	EnsemblPlants:Bra032241.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016209	GO:GO:0016491	GO:GO:0019725
GO:GO:0045454	GO:GO:0051920	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	UniProt:M4ETV9
PFAM:PF00578	PFAM:PF10417	PIRSF:PIRSF000239	PFscan:PS51352	PANTHER:PTHR43503	PANTHER:PTHR43503:SF4
InterPro:Peroxiredoxin_AhpC-typ	InterPro:Peroxiredoxin_C	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0002547D82

Description

AT1G48130 (E=1e-091) ATPER1 | ATPER1; antioxidant/ thioredoxin peroxidase

Coordinates

chrA05:-:12468662..12469653

Molecular Weight (calculated)

25499.6 Da

IEP (calculated)

5.886

GRAVY (calculated)

-0.216

Length

231 amino acids

Sequence
(BLAST)

001: MPGITLGDTV PNLEVETTHK NFKLHDYFAD SWTVLFSHPA SPIYLLSLLT NGLQGDFTPV CTTELGAMGK YAHEFEQRGV KLLGLSCDDI QSHKDWIPDI
101: EAFTPGSKVT YPIIADPNKE IIPQLNMVDP IENGPSRALH IVGPDCKIKL SFLYPSTTGR NMDEVLRALD SLLMAAKHKN KIATPVNWKP DEPVVISPAV
201: SDEEAKKLFP QGFKTAELPS KKGYLRVADV S

Best Arabidopsis Sequence Match ( AT1G48130.1 )
(BLAST)

001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS

Arabidopsis Description

PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.