Factsheet for Bra038102.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72482	Canola	cytosol	44.91	92.38
Bra032241.1-P	Field mustard	cytosol	97.69	91.34
AT1G48130.1	Thale cress	cytosol	90.74	90.74
VIT_05s0020g00600.t01	Wine grape	cytosol	73.61	72.6
TraesCS2B01G174400.1	Wheat	cytosol	70.83	70.18
Solyc03g096040.2.1	Tomato	extracellular	70.83	69.86
TraesCS2D01G154300.2	Wheat	cytosol, plastid	69.91	69.27
KRH42408	Soybean	endoplasmic reticulum	69.44	68.81
KRH58527	Soybean	cytosol, endoplasmic reticulum, mitochondrion	56.02	68.75
PGSC0003DMT400071283	Potato	cytosol	68.98	68.35
Os07t0638300-01	Rice	plastid	68.06	66.82
Os07t0638400-01	Rice	cytosol	65.28	64.09
EER97619	Sorghum	cytosol	65.74	63.96
Zm00001d022278_P001	Maize	cytosol	65.74	62.01
GSMUA_Achr2P03480_001	Banana	cytosol	29.17	58.33
HORVU2Hr1G026810.1	Barley	cytosol	56.94	56.42
VIT_05s0077g00050.t01	Wine grape	cytosol	49.07	55.5
GSMUA_Achr11P...	Banana	cytosol	63.89	55.2
VIT_05s0020g00590.t01	Wine grape	cytosol	37.5	47.93
Bra009181.1-P	Field mustard	plastid	25.0	20.07
Bra038667.1-P	Field mustard	plastid	20.83	20.0
Bra034824.1-P	Field mustard	plastid	24.07	19.92
Bra001415.1-P	Field mustard	plastid	24.54	17.26

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.4.3.1	Gene3D:3.30.1020.10	Gene3D:3.40.30.10	InterPro:AhpC/TSA	EnsemblPlantsGene:Bra038102
EnsemblPlants:Bra038102.1	EnsemblPlants:Bra038102.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016209	GO:GO:0016491	GO:GO:0019725
GO:GO:0045454	GO:GO:0051920	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	UniProt:M4FAI8
PFAM:PF00578	PFAM:PF10417	PIRSF:PIRSF000239	PFscan:PS51352	PANTHER:PTHR43503	PANTHER:PTHR43503:SF4
InterPro:Peroxiredoxin_AhpC-typ	InterPro:Peroxiredoxin_C	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00025477F2

Description

AT1G48130 (E=7e-115) ATPER1 | ATPER1; antioxidant/ thioredoxin peroxidase

Coordinates

chrA05:-:10517356..10518348

Molecular Weight (calculated)

23956.7 Da

IEP (calculated)

5.886

GRAVY (calculated)

-0.291

Length

216 amino acids

Sequence
(BLAST)

001: MPGITLGDTV PNLEVETTHR NFKLHDYFAD SWTVLFSHPG DFTPVCTTEL GAMGKYAHEF EQRGVKLLGL SCDDIQSHKD WIPDIEAFTP GSKVTYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD CKIKLSFLYP STTGRNMDEV LRALDSLLMA AKHKNKIATP VNWKPDEPVV ISPAVSDEEA KKLFPQGFKT
201: AELPSKKGYL RVADVS

Best Arabidopsis Sequence Match ( AT1G48130.1 )
(BLAST)

001: MPGITLGDTV PNLEVETTHD KFKLHDYFAN SWTVLFSHPG DFTPVCTTEL GAMAKYAHEF DKRGVKLLGL SCDDVQSHKD WIKDIEAFNH GSKVNYPIIA
101: DPNKEIIPQL NMIDPIENGP SRALHIVGPD SKIKLSFLYP STTGRNMDEV LRALDSLLMA SKHNNKIATP VNWKPDQPVV ISPAVSDEEA KKMFPQGFKT
201: ADLPSKKGYL RHTEVS

Arabidopsis Description

PER11-Cys peroxiredoxin PER1 [Source:UniProtKB/Swiss-Prot;Acc:O04005]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.