Factsheet for Bra009181.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000234.1-P
Bra001415.1-P
Bra004639.1-P
Bra034824.1-P
Bra038667.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06290.1	Bra000234.1-P	AT2G41680.1	25448674
AT5G06290.1	Bra004639.1-P	AT2G41680.1	25448674
AT5G06290.1	Bra001415.1-P	AT3G11630.1	21798944
AT5G06290.1	Bra034824.1-P	AT3G11630.1	21798944
AT5G06290.1	Bra038667.1-P	AT3G11630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67317	Canola	endoplasmic reticulum	56.13	96.18
GSMUA_Achr3P02970_001	Banana	cytosol	14.5	90.7
CDY67795	Canola	cytosol	81.78	89.43
Bra038667.1-P	Field mustard	plastid	70.63	84.44
AT5G06290.1	Thale cress	plastid	84.01	82.78
Bra034824.1-P	Field mustard	plastid	76.58	78.93
PGSC0003DMT400072569	Potato	cytosol, extracellular, plastid	75.09	75.66
TraesCS2D01G295500.2	Wheat	plastid	72.49	75.58
TraesCS2A01G297500.1	Wheat	plastid	72.49	75.58
Zm00001d050666_P001	Maize	plastid	72.12	74.62
TraesCS2B01G313700.1	Wheat	golgi, plastid	72.49	74.43
EES06920	Sorghum	plastid	71.75	74.23
Solyc10g082030.1.1	Tomato	plastid	73.61	74.16
HORVU2Hr1G073760.2	Barley	plastid	72.12	74.05
Zm00001d016736_P001	Maize	extracellular, mitochondrion, plastid	71.0	73.46
Solyc01g007740.2.1	Tomato	plastid	72.86	73.41
Os02t0537700-01	Rice	extracellular	71.0	73.18
VIT_08s0007g02490.t01	Wine grape	plastid	73.61	72.53
PGSC0003DMT400042222	Potato	plastid	72.86	72.06
KRH67987	Soybean	endoplasmic reticulum	49.07	68.04
Bra001415.1-P	Field mustard	plastid	76.58	67.1
Bra038102.1-P	Field mustard	cytosol	20.07	25.0
Bra032241.1-P	Field mustard	cytosol	20.07	23.38

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.5.3.1	Gene3D:3.40.30.10	InterPro:AhpC/TSA	EnsemblPlantsGene:Bra009181	EnsemblPlants:Bra009181.1
EnsemblPlants:Bra009181.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628
GO:GO:0009987	GO:GO:0010319	GO:GO:0016209	GO:GO:0016491	GO:GO:0019725	GO:GO:0042742
GO:GO:0045454	GO:GO:0048046	GO:GO:0051920	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766
UniProt:M4CY84	PFAM:PF00578	PFAM:PF10417	PIRSF:PIRSF000239	PFscan:PS51352	PANTHER:PTHR10681
PANTHER:PTHR10681:SF140	InterPro:Peroxiredoxin_AhpC-typ	InterPro:Peroxiredoxin_C	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI0002544FE8	SEG:seg	:	:	:	:

Description

AT5G06290 (E=1e-118) 2-Cys Prx B | 2-Cys Prx B (2-Cysteine peroxiredoxin B); antioxidant/ peroxiredoxin

Coordinates

chrA10:+:15554982..15556537

Molecular Weight (calculated)

29313.9 Da

IEP (calculated)

5.149

GRAVY (calculated)

-0.035

Length

269 amino acids

Sequence
(BLAST)

001: MASLASSTTL ISSSTVLLPS KPSPFSPAAS FLRTLPSTAA SPSSLRSGFS SIGSLTCIPS SSRRSFAVKA QADDLPLVGN KAPDFEAEAV FDQEFIKVKL
101: SEYIGKKYVI LFFYPLDFTF VCPTEITAFS DRYEEFEKLN TEVLGVSVDS VFSHLAWVQT ERKSGGLGDL NYPLVSDITK SISKSFGVLI PDQGIALRGL
201: FIIDKEGVIQ HSTINNLGIG RSVDETMRTL QALQYVQENP DEVCPAGWKP GEKSMKPDPK LSKEYFSAI

Best Arabidopsis Sequence Match ( AT5G06290.1 )
(BLAST)

001: MSMASIASSS STTLLSSSRV LLPSKSSLLS PTVSFPRIIP SSSASSSSLC SGFSSLGSLT TNRSASRRNF AVKAQADDLP LVGNKAPDFE AEAVFDQEFI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF SAI

Arabidopsis Description

2-Cys Prx B2-Cys peroxiredoxin BAS1-like, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5R8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.