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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 10
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:cytosol, plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
plastid: 21961694
plastid: 17189339
extracellular: 19038476
nucleus: 19321431
nucleus: 19621931
extracellular: 20433195
plastid: 21433289
extracellular: 23159799
nucleus: 24133045
extracellular: 25047395
nucleus: 26035336
extracellular: 26072143
plasma membrane: 27800704
plastid: 27992503
extracellular: 28232208
gfp PMID: 21961694 doi
Y Zhang, J Su, S Duan, Y Ao, J Dai, J Liu, P Wang, Y Li, B Liu, D Feng, J Wang, H Wang
State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, P, R, China.
msms PMID: 20433195 doi
A Pandey, U Rajamani, J Verma, P Subba, N Chakraborty, A Datta, S Chakraborty, N Chakraborty
National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi-110067, India.
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID: 24133045 doi
DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty
National Institute of Plant Genome Research, New Delhi, India.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 25047395 doi
JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID: 19321431 doi
MK Choudhary, D Basu, A Datta, N Chakraborty, S Chakraborty
National Institute of Plant Genome Research, New Delhi, India.
msms PMID: 26035336 doi
M Li, X Yin, K Sakata, P Yang, S Komatsu
§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
msms PMID: 23159799 doi
SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID: 17189339 doi
T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
msms PMID: 19621931 doi
T Aki, S Yanagisawa
Department of Applied Biological Chemistry, The University of Tokyo, Japan.
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67317 Canola endoplasmic reticulum 53.26 88.53
EES06920 Sorghum plastid 84.67 85.0
Zm00001d016736_P001 Maize extracellular, mitochondrion, plastid 84.29 84.62
Zm00001d050666_P001 Maize plastid 83.14 83.46
TraesCS2D01G295500.2 Wheat plastid 76.63 77.52
TraesCS2A01G297500.1 Wheat plastid 76.63 77.52
TraesCS2B01G313700.1 Wheat golgi, plastid 77.39 77.1
HORVU2Hr1G073760.2 Barley plastid 77.01 76.72
CDY67795 Canola cytosol 71.26 75.61
CDY08508 Canola plastid 73.95 73.95
Bra034824.1-P Field mustard plastid 73.56 73.56
CDY01041 Canola plastid 72.8 73.08
AT3G11630.1 Thale cress plastid 74.33 72.93
CDX73860 Canola plastid 74.71 72.76
Solyc01g007740.2.1 Tomato plastid 74.33 72.66
PGSC0003DMT400042222 Potato plastid 74.71 71.69
VIT_08s0007g02490.t01 Wine grape plastid 74.33 71.06
Bra009181.1-P Field mustard plastid 73.18 71.0
CDY56598 Canola cytosol 73.95 69.68
PGSC0003DMT400072569 Potato cytosol, extracellular, plastid 70.88 69.29
Solyc10g082030.1.1 Tomato plastid 70.88 69.29
AT5G06290.1 Thale cress plastid 72.41 69.23
Bra038667.1-P Field mustard plastid 59.39 68.89
KRH67987 Soybean endoplasmic reticulum 49.04 65.98
CDX73858 Canola plastid 74.71 65.22
Bra001415.1-P Field mustard plastid 74.33 63.19
Os07t0638300-01 Rice plastid 22.22 26.36
Os07t0638400-01 Rice cytosol 20.31 24.09
Protein Annotations
KEGG:00480+1.11.1.15MapMan:10.5.3.1Gene3D:3.40.30.10EntrezGene:4329578EMBL:AK068919EMBL:AK104703
EMBL:AM039889InterPro:AhpC/TSAProteinID:BAD27915.1ProteinID:BAD28826.1ProteinID:BAF08964.1ProteinID:BAS79077.1
ProteinID:EEE57135.1GO:GO:0003674GO:GO:0003824GO:GO:0004601GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016209GO:GO:0016491GO:GO:0019725GO:GO:0042744GO:GO:0045454GO:GO:0051920
GO:GO:0055114GO:GO:0098869InterPro:IPR013766EnsemblPlantsGene:Os02g0537700EnsemblPlants:Os02t0537700-01PFAM:PF00578
PFAM:PF10417PIRSF:PIRSF000239PFscan:PS51352PANTHER:PTHR10681PANTHER:PTHR10681:SF140InterPro:Peroxiredoxin_AhpC-typ
InterPro:Peroxiredoxin_CUniProt:Q6ER94SUPFAM:SSF52833InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI00003CE552
RefSeq:XP_015627405.1SEG:seg::::
Description
rice 2-Cys peroxiredoxin BAS1, chloroplast 2-Cys peroxiredoxin BAS1, 2-Cys Prx BAS1Similar to 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol- specific antioxidant protein) (Fragment). (Os02t0537700-01)
Coordinates
chr2:+:19882081..19885745
Molecular Weight (calculated)
28098.4 Da
IEP (calculated)
5.771
GRAVY (calculated)
-0.046
Length
261 amino acids
Sequence
(BLAST)
001: MAACCSSLAT AVSSSSAKPL AGIPPAAPHS LSLPRAPAAR PLRLSASSSR SARASSFVAR AGGVDDAPLV GNKAPDFDAE AVFDQEFINV KLSDYIGKKY
101: VILFFYPLDF TFVCPTEITA FSDRYDEFEK LNTEILGVSI DSVFSHLAWV QTDRKSGGLG DLKYPLISDV TKSISKSFGV LIPDQGIALR GLFIIDKEGV
201: IQHSTINNLA IGRSVDETMR TLQALQYVQD NPDEVCPAGW KPGDKSMKPD PKGSKEYFAA I
Best Arabidopsis Sequence Match ( AT5G06290.1 )
(BLAST)
001: MSMASIASSS STTLLSSSRV LLPSKSSLLS PTVSFPRIIP SSSASSSSLC SGFSSLGSLT TNRSASRRNF AVKAQADDLP LVGNKAPDFE AEAVFDQEFI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF SAI
Arabidopsis Description
2-Cys Prx B2-Cys peroxiredoxin BAS1-like, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5R8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.