Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 10
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
21961694
|
plastid:
17189339
extracellular: 19038476 nucleus: 19321431 nucleus: 19621931 extracellular: 20433195 plastid: 21433289 extracellular: 23159799 nucleus: 24133045 extracellular: 25047395 nucleus: 26035336 extracellular: 26072143 plasma membrane: 27800704 plastid: 27992503 extracellular: 28232208 |
gfp PMID:
21961694
doi
State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, P, R, China.
msms PMID:
20433195
doi
National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi-110067, India.
msms PMID:
26072143
doi
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
25047395
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID:
26035336
doi
§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
msms PMID:
23159799
doi
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID:
21433289
doi
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID:
17189339
doi
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
msms PMID:
19038476
doi
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Os02t0537700-01 | |
Os07t0657900-02 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G11630.1 | Os07t0657900-02 | AT2G41680.1 | 25448674 |
AT5G06290.1 | Os07t0657900-02 | AT2G41680.1 | 25448674 |
AT5G06290.1 | Os02t0537700-01 | AT3G11630.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY67317 | Canola | endoplasmic reticulum | 53.26 | 88.53 |
EES06920 | Sorghum | plastid | 84.67 | 85.0 |
Zm00001d016736_P001 | Maize | extracellular, mitochondrion, plastid | 84.29 | 84.62 |
Zm00001d050666_P001 | Maize | plastid | 83.14 | 83.46 |
TraesCS2D01G295500.2 | Wheat | plastid | 76.63 | 77.52 |
TraesCS2A01G297500.1 | Wheat | plastid | 76.63 | 77.52 |
TraesCS2B01G313700.1 | Wheat | golgi, plastid | 77.39 | 77.1 |
HORVU2Hr1G073760.2 | Barley | plastid | 77.01 | 76.72 |
CDY67795 | Canola | cytosol | 71.26 | 75.61 |
CDY08508 | Canola | plastid | 73.95 | 73.95 |
Bra034824.1-P | Field mustard | plastid | 73.56 | 73.56 |
CDY01041 | Canola | plastid | 72.8 | 73.08 |
AT3G11630.1 | Thale cress | plastid | 74.33 | 72.93 |
CDX73860 | Canola | plastid | 74.71 | 72.76 |
Solyc01g007740.2.1 | Tomato | plastid | 74.33 | 72.66 |
PGSC0003DMT400042222 | Potato | plastid | 74.71 | 71.69 |
VIT_08s0007g02490.t01 | Wine grape | plastid | 74.33 | 71.06 |
Bra009181.1-P | Field mustard | plastid | 73.18 | 71.0 |
CDY56598 | Canola | cytosol | 73.95 | 69.68 |
PGSC0003DMT400072569 | Potato | cytosol, extracellular, plastid | 70.88 | 69.29 |
Solyc10g082030.1.1 | Tomato | plastid | 70.88 | 69.29 |
AT5G06290.1 | Thale cress | plastid | 72.41 | 69.23 |
Bra038667.1-P | Field mustard | plastid | 59.39 | 68.89 |
KRH67987 | Soybean | endoplasmic reticulum | 49.04 | 65.98 |
CDX73858 | Canola | plastid | 74.71 | 65.22 |
Bra001415.1-P | Field mustard | plastid | 74.33 | 63.19 |
Os07t0638300-01 | Rice | plastid | 22.22 | 26.36 |
Os07t0638400-01 | Rice | cytosol | 20.31 | 24.09 |
Protein Annotations
KEGG:00480+1.11.1.15 | MapMan:10.5.3.1 | Gene3D:3.40.30.10 | EntrezGene:4329578 | EMBL:AK068919 | EMBL:AK104703 |
EMBL:AM039889 | InterPro:AhpC/TSA | ProteinID:BAD27915.1 | ProteinID:BAD28826.1 | ProteinID:BAF08964.1 | ProteinID:BAS79077.1 |
ProteinID:EEE57135.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009056 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0016209 | GO:GO:0016491 | GO:GO:0019725 | GO:GO:0042744 | GO:GO:0045454 | GO:GO:0051920 |
GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | EnsemblPlantsGene:Os02g0537700 | EnsemblPlants:Os02t0537700-01 | PFAM:PF00578 |
PFAM:PF10417 | PIRSF:PIRSF000239 | PFscan:PS51352 | PANTHER:PTHR10681 | PANTHER:PTHR10681:SF140 | InterPro:Peroxiredoxin_AhpC-typ |
InterPro:Peroxiredoxin_C | UniProt:Q6ER94 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00003CE552 |
RefSeq:XP_015627405.1 | SEG:seg | : | : | : | : |
Description
rice 2-Cys peroxiredoxin BAS1, chloroplast 2-Cys peroxiredoxin BAS1, 2-Cys Prx BAS1Similar to 2-cys peroxiredoxin BAS1, chloroplast precursor (EC 1.11.1.15) (Thiol- specific antioxidant protein) (Fragment). (Os02t0537700-01)
Coordinates
chr2:+:19882081..19885745
Molecular Weight (calculated)
28098.4 Da
IEP (calculated)
5.771
GRAVY (calculated)
-0.046
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MAACCSSLAT AVSSSSAKPL AGIPPAAPHS LSLPRAPAAR PLRLSASSSR SARASSFVAR AGGVDDAPLV GNKAPDFDAE AVFDQEFINV KLSDYIGKKY
101: VILFFYPLDF TFVCPTEITA FSDRYDEFEK LNTEILGVSI DSVFSHLAWV QTDRKSGGLG DLKYPLISDV TKSISKSFGV LIPDQGIALR GLFIIDKEGV
201: IQHSTINNLA IGRSVDETMR TLQALQYVQD NPDEVCPAGW KPGDKSMKPD PKGSKEYFAA I
101: VILFFYPLDF TFVCPTEITA FSDRYDEFEK LNTEILGVSI DSVFSHLAWV QTDRKSGGLG DLKYPLISDV TKSISKSFGV LIPDQGIALR GLFIIDKEGV
201: IQHSTINNLA IGRSVDETMR TLQALQYVQD NPDEVCPAGW KPGDKSMKPD PKGSKEYFAA I
001: MSMASIASSS STTLLSSSRV LLPSKSSLLS PTVSFPRIIP SSSASSSSLC SGFSSLGSLT TNRSASRRNF AVKAQADDLP LVGNKAPDFE AEAVFDQEFI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF SAI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF SAI
Arabidopsis Description
2-Cys Prx B2-Cys peroxiredoxin BAS1-like, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5R8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.