Factsheet for Os07t0657900-02

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0963400-01
Os03t0206900-01
Os03t0806700-01
Os05t0367100-01
Os06t0473200-02
Os07t0572300-01
Os07t0657900-02
Os12t0209700-01
Os12t0580700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G41680.1	Os05t0367100-01	AT1G02870.1	21798944
AT2G41680.1	Os03t0206900-01	AT1G49850.1	21798944
AT2G41680.1	Os12t0580700-01	AT1G49850.1	21798944
AT2G41680.1	Os01t0963400-01	AT1G76760.1	21798944
AT2G41680.1	Os07t0657900-02	AT2G41680.1	21798944
AT2G41680.1	Os03t0806700-01	AT3G04860.1	21798944
AT2G41680.1	Os07t0572300-01	AT3G04860.1	21798944
AT2G41680.1	Os12t0209700-01	AT4G10930.1	21798944
AT2G41680.1	Os06t0473200-02	AT5G40440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G023170.1	Barley	cytosol	83.88	89.63
TraesCS2B01G154700.1	Wheat	plastid	85.83	85.0
GSMUA_Achr8P09560_001	Banana	cytosol	37.86	84.42
KXG36845	Sorghum	plastid	85.05	83.59
PGSC0003DMT400070106	Potato	cytosol	35.34	78.79
Zm00001d022381_P016	Maize	plastid	84.08	78.3
GSMUA_Achr8P09570_001	Banana	cytosol	25.83	76.0
KRH33290	Soybean	nucleus	76.5	75.92
Bra000234.1-P	Field mustard	plastid	73.79	74.36
CDY35405	Canola	plastid	73.59	74.17
KRH72015	Soybean	nucleus	75.15	74.14
CDY22534	Canola	plastid	73.4	73.97
Bra004639.1-P	Field mustard	plastid	74.76	73.9
VIT_08s0007g08760.t01	Wine grape	plastid	75.73	73.72
CDX79923	Canola	mitochondrion, plastid	74.95	72.28
AT2G41680.1	Thale cress	plastid	74.17	72.21
CDY23835	Canola	plastid	74.95	71.09
PGSC0003DMT400060907	Potato	plastid	74.37	70.53
Solyc10g080080.1.1	Tomato	plastid	74.37	70.53
TraesCS2A01G132200.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.55	70.35
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	77.28	70.32
Solyc04g016010.2.1	Tomato	nucleus	67.77	64.99
Os02t0713400-01	Rice	extracellular, plasma membrane	31.26	48.64
PGSC0003DMT400070103	Potato	plastid	18.25	43.72
Os04t0524136-00	Rice	plastid	9.9	25.63

Protein Annotations

KEGG:00450+1.8.1.9	MapMan:10.5.2	Gene3D:3.40.30.10	Gene3D:3.50.50.60	EntrezGene:4344159	EMBL:AJ582621
EMBL:AP014963	ProteinID:BAF22429.1	ProteinID:EEE67738.1	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006950	GO:GO:0008047	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0010380	GO:GO:0010581	GO:GO:0016491	GO:GO:0016671	GO:GO:0019430
GO:GO:0019725	GO:GO:0030234	GO:GO:0042744	GO:GO:0042802	GO:GO:0043085	GO:GO:0045454
GO:GO:0055114	InterPro:IPR013766	InterPro:IPR036188	EnsemblPlantsGene:Os07g0657900	EnsemblPlants:Os07t0657900-02	PFAM:PF00085
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00469	ScanProsite:PS00573	PFscan:PS51352	PANTHER:PTHR42863
PANTHER:PTHR42863:SF1	InterPro:Pyr_nucl-diS_OxRdtase_2_AS	InterPro:Pyridine_nuc-diS_OxRdtase_2	UniProt:Q70G58	SUPFAM:SSF51905	SUPFAM:SSF52833
TIGRFAMs:TIGR01292	InterPro:Thioredox_Rdtase	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00019349F1	RefSeq:XP_015646853.1
SEG:seg	:	:	:	:	:

Description

CHLOROPLAST NADPH THIOREDOXIN REDUCTASESimilar to Thioredoxin reductase. (Os07t0657900-01);NADPH thioredoxin reductase, Chloroplast detoxification (Os07t0657900-02)

Coordinates

chr7:+:27694622..27699049

Molecular Weight (calculated)

56153.9 Da

IEP (calculated)

6.461

GRAVY (calculated)

-0.256

Length

515 amino acids

Sequence
(BLAST)

001: MAVTRLAVAA ALSAAPPSSR RRRAFFHHSC RPLPSSAAAA AKALRASAAP AVDEEAPASP PPSDLGKGVE NLVIIGSGPA GYTAAIYAAR ANLKPVVFEG
101: YQVGGVPGGQ LMTTTEVENF PGFPDGVTGP DLMDKMRKQA ERWGAELHQE DVEFVNVKSR PFVIRSSDRE VKCHSVIIAT GAAAKRLRLP REDEFWSRGI
201: SACAICDGAS PLFKGQVLAV VGGGDTATEE AIYLTKYARH VHLLVRKDQL RASKAMQDRV LNNPNITVHF NTEAVDVVSN PKGQMSGIQL KRTDTGEESV
301: LEVKGLFYGI GHTPNSQLLQ GQIDLDDAGY ILVEEGTAKT SVDGVFAAGD VQDHEWRQAV TAAGSGCVAA LSVERYLVAN DLLVEFHQPV REEKEKEITD
401: RDVEMGFDIS HTKHRGQYAL RKVYHESPRL VCVLYTSPTC GPCRTLKPIL SKVIDEYNEH VHFVEIDIEE DPEIAEAAGI MGTPCVQFFK NKEMLRTVSG
501: VKMKKEYREF IESNK

Best Arabidopsis Sequence Match ( AT2G41680.1 )
(BLAST)

001: MAASPKIGIG IASVSSPHRV SAASSALSPP PHLFFLTTTT TTRHGGSYLL RQPTRTRSSD SLRLRVSATA NSPSSSSSGG EIIENVVIIG SGPAGYTAAI
101: YAARANLKPV VFEGYQMGGV PGGQLMTTTE VENFPGFPDG ITGPDLMEKM RKQAERWGAE LYPEDVESLS VTTAPFTVQT SERKVKCHSI IYATGATARR
201: LRLPREEEFW SRGISACAIC DGASPLFKGQ VLAVVGGGDT ATEEALYLTK YARHVHLLVR RDQLRASKAM QDRVINNPNI TVHYNTETVD VLSNTKGQMS
301: GILLRRLDTG EETELEAKGL FYGIGHSPNS QLLEGQVELD SSGYVLVREG TSNTSVEGVF AAGDVQDHEW RQAVTAAGSG CIAALSAERY LTSNNLLVEF
401: HQPQTEEAKK EFTQRDVQEK FDITLTKHKG QYALRKLYHE SPRVILVLYT SPTCGPCRTL KPILNKVVDE YNHDVHFVEI DIEEDQEIAE AAGIMGTPCV
501: QFFKNKEMLR TISGVKMKKE YREFIEANK

Arabidopsis Description

NTRCThioredoxin reductase [Source:UniProtKB/TrEMBL;Acc:A0A178VZE7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.