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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion, peroxisome, plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Os02t0186400-01
Os03t0747200-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G04860.1 Os03t0747200-01 AT1G05410.1 21798944
AT3G04860.1 Os02t0186400-01 AT4G32190.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G204300.1 Wheat plastid 81.34 81.63
TraesCS2B01G223900.1 Wheat plastid 81.34 81.63
TraesCS2A01G196200.1 Wheat plastid 80.99 81.27
HORVU2Hr1G038060.1 Barley plastid 78.17 79.29
Zm00001d021869_P001 Maize plastid 75.35 75.35
OQU90135 Sorghum plastid 78.87 65.88
GSMUA_Achr7P07540_001 Banana endoplasmic reticulum, nucleus, peroxisome, plastid 54.58 59.39
Os03t0806700-01 Rice cytosol, endoplasmic reticulum, peroxisome, plastid 60.56 59.11
GSMUA_Achr5P24690_001 Banana cytosol 59.86 58.62
GSMUA_Achr7P01840_001 Banana cytosol, peroxisome, plastid 53.52 57.58
VIT_14s0030g01760.t01 Wine grape cytosol, plastid 55.63 55.44
VIT_07s0151g00930.t01 Wine grape cytosol, plastid 58.45 55.33
VIT_05s0020g03340.t01 Wine grape cytosol 57.39 54.33
Solyc01g097790.2.1 Tomato cytosol 57.04 54.18
KRH32026 Soybean cytosol, plastid 57.04 54.0
KRH71412 Soybean cytosol 57.04 53.82
PGSC0003DMT400057872 Potato cytosol 56.34 53.51
KRG92651 Soybean cytosol 55.28 52.33
AT5G28150.1 Thale cress cytosol, plastid 53.17 52.25
AT3G04860.1 Thale cress plastid 53.17 52.25
CDY52485 Canola plastid 53.87 52.22
KRG95548 Soybean cytosol 55.28 52.16
Bra009991.1-P Field mustard plastid 53.52 51.88
CDX86191 Canola plastid 53.52 51.88
KRH34070 Soybean cytosol, endoplasmic reticulum, nucleus 54.58 51.49
KRH68710 Soybean plastid 53.52 51.18
Bra040118.1-P Field mustard plastid 50.35 50.71
CDY00013 Canola cytosol, plastid 52.46 50.51
CDY72112 Canola cytosol, peroxisome, plastid 50.0 50.35
CDY21108 Canola plastid 50.0 50.35
CDY30020 Canola cytosol, plastid 50.0 50.35
CDY50761 Canola cytosol, peroxisome, plastid 50.7 50.17
KRG96949 Soybean cytosol, plastid 53.87 50.0
PGSC0003DMT400077341 Potato cytosol, peroxisome, plasma membrane 52.82 49.51
Solyc09g075960.1.1 Tomato nucleus, peroxisome, plasma membrane 52.82 49.51
Bra040410.1-P Field mustard cytosol, nucleus, peroxisome 49.3 48.95
KRH67230 Soybean cytosol 52.82 47.92
Bra036119.1-P Field mustard mitochondrion 53.17 39.53
Os05t0108400-01 Rice cytosol 36.62 33.99
CDY59819 Canola cytosol, mitochondrion, plasma membrane 52.82 33.78
Os01t0909400-01 Rice cytosol, plastid 38.03 33.23
Os02t0198800-01 Rice cytosol, nucleus 36.62 27.96
Os04t0407500-00 Rice cytosol, plastid 24.3 27.6
Os12t0149000-01 Rice plastid 29.58 25.61
Os08t0439600-00 Rice plastid 27.46 19.21
Os06t0181800-00 Rice plastid 23.59 19.09
Os09t0416600-02 Rice plastid 28.87 18.47
Os02t0695050-00 Rice extracellular, golgi, mitochondrion 10.56 11.54
Protein Annotations
EMBL:AK074013EnsemblPlants:Os07t0572300-01EnsemblPlantsGene:Os07g0572300EntrezGene:4343674InterPro:DUF868_plnPANTHER:PTHR31972
PANTHER:PTHR31972:SF15PFAM:PF05910ProteinID:BAC84673.1ProteinID:BAF21971.1ProteinID:BAT02247.1ProteinID:EAZ40371.1
RefSeq:XP_015644735.1UniParc:UPI00001BF78DUniProt:Q6YTU4MapMan:35.2::
Description
Protein of unknown function DUF868, plant family protein. (Os07t0572300-01)
Coordinates
chr7:+:23106363..23108161
Molecular Weight (calculated)
31491.0 Da
IEP (calculated)
8.795
GRAVY (calculated)
-0.144
Length
284 amino acids
Sequence
(BLAST)
001: MRDFASCLSQ SGVQVAHSSS PGGQNMVQCT YLARLRGKSC SVTVTWSKMT MGQALSVAVD DSSNRCLCKA EIKPWLFSKR KGSKAMEVDG GALDIVWDLS
101: SAKFAAGPEP VEGFYVALVC DLEAVLVLGD MRKDGDHRVS SDVLASNAVM IARKEHVYGK KVYSAKARFL DIGQLHHITI ECDTSGLKDP SLEIRIGKKR
201: VMQVKRLAWK FRGNQTVYVD GLPVEVLWDV HDWLFGSSNK CAVFLFQSGQ SMEKLLSRSC SQNEKELQAH RFGFTLILNA WKTE
Best Arabidopsis Sequence Match ( AT5G28150.1 )
(BLAST)
001: MKDFPSCFGE NGVQVADSSS SSNSGKNAQN LVTCIYQCRI RGRNCLITVT WTKNLMGQSV TVGVDDSCNQ SLCKVEIKPW LFTKRKGSKS LEAYSCNIDV
101: FWDLSSAKFG SGPEALGGFY VGVVVDKEMV LLLGDMKKEA FKKTNASPSS LGAVFIAKKE HVFGKRVFAT KAQLFADGKF HDLLIECDTN VTDPCLVVRV
201: DGKTLLQVKR LKWKFRGNDT IVVNKMTVEV LWDVHSWLFG LPTTGNAVFM FRTCQSTEKS LSFSQDVTTT NSKSHSFGFS LILYAWKSE
Arabidopsis Description
At5g28150/T24G3_80 [Source:UniProtKB/TrEMBL;Acc:Q8RX84]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.