Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040118.1-P | Field mustard | plastid | 98.23 | 98.23 |
| CDY30020 | Canola | cytosol, plastid | 94.33 | 94.33 |
| AT3G04860.1 | Thale cress | plastid | 84.4 | 82.35 |
| CDY50761 | Canola | cytosol, peroxisome, plastid | 79.08 | 77.7 |
| CDY72112 | Canola | cytosol, peroxisome, plastid | 76.95 | 76.95 |
| CDY52485 | Canola | plastid | 75.18 | 72.35 |
| CDX86191 | Canola | plastid | 75.18 | 72.35 |
| CDY00013 | Canola | cytosol, plastid | 74.47 | 71.19 |
| VIT_14s0030g01760.t01 | Wine grape | cytosol, plastid | 60.99 | 60.35 |
| Solyc01g097790.2.1 | Tomato | cytosol | 61.35 | 57.86 |
| PGSC0003DMT400057872 | Potato | cytosol | 61.35 | 57.86 |
| KRG96949 | Soybean | cytosol, plastid | 62.06 | 57.19 |
| KRG92651 | Soybean | cytosol | 60.64 | 57.0 |
| KRH68710 | Soybean | plastid | 59.93 | 56.9 |
| KRH34070 | Soybean | cytosol, endoplasmic reticulum, nucleus | 59.93 | 56.15 |
| GSMUA_Achr7P07540_001 | Banana | endoplasmic reticulum, nucleus, peroxisome, plastid | 50.0 | 54.02 |
| GSMUA_Achr7P01840_001 | Banana | cytosol, peroxisome, plastid | 48.94 | 52.27 |
| Os03t0806700-01 | Rice | cytosol, endoplasmic reticulum, peroxisome, plastid | 53.9 | 52.23 |
| EER93250 | Sorghum | cytosol, plastid | 53.55 | 51.89 |
| Zm00001d013042_P001 | Maize | plastid | 52.84 | 51.2 |
| HORVU5Hr1G109570.1 | Barley | cytosol, plastid | 52.13 | 50.34 |
| Os07t0572300-01 | Rice | plastid | 50.35 | 50.0 |
| GSMUA_Achr5P24690_001 | Banana | cytosol | 51.42 | 50.0 |
| TraesCS5A01G456500.1 | Wheat | plastid | 51.77 | 50.0 |
| HORVU2Hr1G038060.1 | Barley | plastid | 48.94 | 49.29 |
| TraesCS2D01G204300.1 | Wheat | plastid | 48.94 | 48.76 |
| Zm00001d034527_P001 | Maize | plastid | 50.71 | 48.64 |
| TraesCS5D01G467300.1 | Wheat | cytosol, plastid | 52.84 | 48.38 |
| CDY59819 | Canola | cytosol, mitochondrion, plasma membrane | 75.18 | 47.75 |
| TraesCS2B01G223900.1 | Wheat | plastid | 47.87 | 47.7 |
| TraesCS2A01G196200.1 | Wheat | plastid | 47.16 | 47.0 |
| Zm00001d021869_P001 | Maize | plastid | 45.74 | 45.42 |
| TraesCS5B01G465500.1 | Wheat | plastid | 52.84 | 44.35 |
| OQU90135 | Sorghum | plastid | 47.52 | 39.41 |
| CDY27882 | Canola | nucleus | 38.65 | 37.46 |
| CDY00849 | Canola | nucleus | 38.65 | 37.46 |
| CDX77134 | Canola | cytosol, plastid | 39.72 | 34.67 |
| CDX85324 | Canola | plastid | 32.62 | 33.09 |
| CDY48744 | Canola | mitochondrion, plastid | 35.46 | 32.89 |
| CDY05690 | Canola | mitochondrion, plastid | 34.75 | 32.67 |
| CDX86317 | Canola | plastid | 35.46 | 32.57 |
| CDY30531 | Canola | plastid | 37.59 | 32.32 |
| CDY19961 | Canola | plastid | 34.75 | 32.03 |
| CDY00069 | Canola | plastid | 34.75 | 31.82 |
| CDY66553 | Canola | cytosol | 30.85 | 30.85 |
| CDX82547 | Canola | cytosol | 30.85 | 29.9 |
| CDX85733 | Canola | cytosol, nucleus, plastid | 31.91 | 26.24 |
| CDY51100 | Canola | cytosol | 31.56 | 26.18 |
| CDX79683 | Canola | cytosol | 28.37 | 25.24 |
| CDX69793 | Canola | nucleus | 33.33 | 25.0 |
| CDX84556 | Canola | cytosol | 28.37 | 24.92 |
| CDX97072 | Canola | nucleus | 33.33 | 24.29 |
| CDX76763 | Canola | plastid | 25.53 | 20.63 |
| CDY33155 | Canola | cytosol | 26.95 | 19.0 |
| CDY56275 | Canola | cytosol | 10.28 | 18.95 |
Protein Annotations
| EnsemblPlants:CDY21108 | EnsemblPlantsGene:GSBRNA2T00015286001 | InterPro:DUF868_pln | PANTHER:PTHR31972 | PANTHER:PTHR31972:SF40 | PFAM:PF05910 |
| ProteinID:CDY21108 | ProteinID:CDY21108.1 | UniParc:UPI0004EE7AA1 | UniProt:A0A078G8T1 | MapMan:35.2 | : |
Description
BnaA01g33390DBnaA01g33390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8T1]
Coordinates
chrLK032116:+:29909..30757
Molecular Weight (calculated)
31405.9 Da
IEP (calculated)
8.483
GRAVY (calculated)
-0.018
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDFTSCSSE NGVQVTDPSS SNAVRVSQNL VVCIYRCCIR GGTCLITVTW TKTLMGLCVT IGVDDSCNRS LCKLEIKPWL FTKRKGYKNL EACDVYWDLS
101: SAKFGSSPEP LGGFYVSVLV DKEMVLLLGD MKKEALKKTK AASSLGAVFI AKKEHVFGKR TFATKAQFSG DGETHDLVVE CDTSVSDPCL VVCVDGKTLM
201: EVKRLRWKFR GNETIVVNRV SVEVLWDVHS WFFGVPSSPG NGVFMFRTCQ AVEKTWSSTQ VPTSLRPQSF GFTLFLYAWK NE
101: SAKFGSSPEP LGGFYVSVLV DKEMVLLLGD MKKEALKKTK AASSLGAVFI AKKEHVFGKR TFATKAQFSG DGETHDLVVE CDTSVSDPCL VVCVDGKTLM
201: EVKRLRWKFR GNETIVVNRV SVEVLWDVHS WFFGVPSSPG NGVFMFRTCQ AVEKTWSSTQ VPTSLRPQSF GFTLFLYAWK NE
001: MRDFPSCSGE NGVQIADSSS SSSAGRNAQN LVICIYRCRI RGRTCLITVT WTKNLMGQCV TVGVDDSCNR SLCKVEIKPW LFTKRKGSKT LEAYACNIDV
101: FWDLSSAKFG SSPEPLGGFY VGVVVDKEMV LLLGDMKKEA FKKTNAAPSS SLGAVFIAKK EHVFGKRTFA TKAQFSGDGK THDLVIECDT SLSDPCLIVR
201: VDGKILMQVQ RLHWKFRGND TIIVNRISVE VLWDVHSWFF GLPSSPGNAV FMFRTCQSVE KTWSFTQVPT SSKSQSFGFS LILYAWKNE
101: FWDLSSAKFG SSPEPLGGFY VGVVVDKEMV LLLGDMKKEA FKKTNAAPSS SLGAVFIAKK EHVFGKRTFA TKAQFSGDGK THDLVIECDT SLSDPCLIVR
201: VDGKILMQVQ RLHWKFRGND TIIVNRISVE VLWDVHSWFF GLPSSPGNAV FMFRTCQSVE KTWSFTQVPT SSKSQSFGFS LILYAWKNE
Arabidopsis Description
AT3g04860/T9J14_19 [Source:UniProtKB/TrEMBL;Acc:Q9CAV2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.