Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- cytosol 2
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
- golgi 1
- endoplasmic reticulum 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0186400-01 | |
| Os03t0747200-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G04860.1 | Os03t0747200-01 | AT1G05410.1 | 21798944 |
| AT3G04860.1 | Os02t0186400-01 | AT4G32190.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93250 | Sorghum | cytosol, plastid | 93.13 | 93.13 |
| Zm00001d013042_P001 | Maize | plastid | 92.44 | 92.44 |
| Zm00001d034527_P001 | Maize | plastid | 89.69 | 88.78 |
| HORVU5Hr1G109570.1 | Barley | cytosol, plastid | 89.0 | 88.7 |
| TraesCS5A01G456500.1 | Wheat | plastid | 88.66 | 88.36 |
| TraesCS5D01G467300.1 | Wheat | cytosol, plastid | 87.97 | 83.12 |
| TraesCS5B01G465500.1 | Wheat | plastid | 87.97 | 76.19 |
| GSMUA_Achr7P07540_001 | Banana | endoplasmic reticulum, nucleus, peroxisome, plastid | 65.98 | 73.56 |
| GSMUA_Achr5P24690_001 | Banana | cytosol | 72.85 | 73.1 |
| GSMUA_Achr7P01840_001 | Banana | cytosol, peroxisome, plastid | 63.92 | 70.45 |
| KRH71412 | Soybean | cytosol | 66.32 | 64.12 |
| KRH32026 | Soybean | cytosol, plastid | 65.98 | 64.0 |
| VIT_07s0151g00930.t01 | Wine grape | cytosol, plastid | 65.64 | 63.67 |
| Solyc01g097790.2.1 | Tomato | cytosol | 65.29 | 63.55 |
| PGSC0003DMT400057872 | Potato | cytosol | 64.95 | 63.21 |
| VIT_14s0030g01760.t01 | Wine grape | cytosol, plastid | 61.51 | 62.81 |
| KRG95548 | Soybean | cytosol | 64.95 | 62.79 |
| VIT_05s0020g03340.t01 | Wine grape | cytosol | 63.23 | 61.33 |
| Os07t0572300-01 | Rice | plastid | 59.11 | 60.56 |
| KRG92651 | Soybean | cytosol | 62.2 | 60.33 |
| KRH68710 | Soybean | plastid | 61.51 | 60.27 |
| KRH34070 | Soybean | cytosol, endoplasmic reticulum, nucleus | 61.86 | 59.8 |
| AT5G28150.1 | Thale cress | cytosol, plastid | 58.08 | 58.48 |
| Bra009991.1-P | Field mustard | plastid | 58.76 | 58.36 |
| CDX86191 | Canola | plastid | 58.76 | 58.36 |
| CDY52485 | Canola | plastid | 58.76 | 58.36 |
| KRG96949 | Soybean | cytosol, plastid | 61.17 | 58.17 |
| KRH67230 | Soybean | cytosol | 62.54 | 58.15 |
| AT3G04860.1 | Thale cress | plastid | 57.73 | 58.13 |
| CDY00013 | Canola | cytosol, plastid | 57.73 | 56.95 |
| Bra040410.1-P | Field mustard | cytosol, nucleus, peroxisome | 54.98 | 55.94 |
| PGSC0003DMT400077341 | Potato | cytosol, peroxisome, plasma membrane | 58.08 | 55.78 |
| CDY50761 | Canola | cytosol, peroxisome, plastid | 54.98 | 55.75 |
| Solyc09g075960.1.1 | Tomato | nucleus, peroxisome, plasma membrane | 57.73 | 55.45 |
| CDY72112 | Canola | cytosol, peroxisome, plastid | 53.61 | 55.32 |
| CDY30020 | Canola | cytosol, plastid | 52.23 | 53.9 |
| CDY21108 | Canola | plastid | 52.23 | 53.9 |
| Bra040118.1-P | Field mustard | plastid | 51.55 | 53.19 |
| Bra036119.1-P | Field mustard | mitochondrion | 57.73 | 43.98 |
| CDY59819 | Canola | cytosol, mitochondrion, plasma membrane | 57.73 | 37.84 |
| Os01t0909400-01 | Rice | cytosol, plastid | 37.8 | 33.85 |
| Os05t0108400-01 | Rice | cytosol | 34.71 | 33.01 |
| Os04t0407500-00 | Rice | cytosol, plastid | 23.37 | 27.2 |
| Os02t0198800-01 | Rice | cytosol, nucleus | 34.36 | 26.88 |
| Os12t0149000-01 | Rice | plastid | 28.87 | 25.61 |
| Os06t0181800-00 | Rice | plastid | 24.4 | 20.23 |
| Os08t0439600-00 | Rice | plastid | 27.15 | 19.46 |
| Os09t0416600-02 | Rice | plastid | 29.21 | 19.14 |
| Os02t0695050-00 | Rice | extracellular, golgi, mitochondrion | 11.0 | 12.31 |
Protein Annotations
| EMBL:AK062034 | EnsemblPlants:Os03t0806700-01 | EnsemblPlantsGene:Os03g0806700 | EntrezGene:4334504 | InterPro:DUF868_pln | PANTHER:PTHR31972 |
| PANTHER:PTHR31972:SF4 | PFAM:PF05910 | ProteinID:AAP21412.1 | ProteinID:ABF99447.1 | ProteinID:BAF13551.1 | ProteinID:BAS86952.1 |
| RefSeq:XP_015633310.1 | SEG:seg | UniParc:UPI00001909D7 | UniProt:Q84M57 | MapMan:35.2 | : |
Description
Protein of unknown function DUF868, plant family protein. (Os03t0806700-01);Protein of unknown function DUF868, plant family protein. (Os03t0806700-02)
Coordinates
chr3:+:33711473..33713542
Molecular Weight (calculated)
32508.3 Da
IEP (calculated)
8.131
GRAVY (calculated)
-0.084
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDFPSCFGE SGVQIADASS SSSSAGKGAA QNLVTCLYQA QFSGRPCVIS VTWSKSLMGQ GLSIGVDDLS NQCLCKADIK PWLFSKKKGS KRLDVEDGKI
101: EIFWDLSGAK FGAGPEPMEG FYVAVVFDLE LILLLGDMKK DAYRKTGANR PMLNAAFVAR REHIYGKKIY TAKAQFCENG QFHDVVIECD TVSLKDPCLE
201: IRVDKKPVMQ VKRLAWKFRG NQTILVDGLP VEVFWDVHSW LFGLTTSNAV FMFQTCQAPE KSMPWSYSQV FRESQLQGLG FSLILYAWKL E
101: EIFWDLSGAK FGAGPEPMEG FYVAVVFDLE LILLLGDMKK DAYRKTGANR PMLNAAFVAR REHIYGKKIY TAKAQFCENG QFHDVVIECD TVSLKDPCLE
201: IRVDKKPVMQ VKRLAWKFRG NQTILVDGLP VEVFWDVHSW LFGLTTSNAV FMFQTCQAPE KSMPWSYSQV FRESQLQGLG FSLILYAWKL E
001: MKDFPSCFGE NGVQVADSSS SSNSGKNAQN LVTCIYQCRI RGRNCLITVT WTKNLMGQSV TVGVDDSCNQ SLCKVEIKPW LFTKRKGSKS LEAYSCNIDV
101: FWDLSSAKFG SGPEALGGFY VGVVVDKEMV LLLGDMKKEA FKKTNASPSS LGAVFIAKKE HVFGKRVFAT KAQLFADGKF HDLLIECDTN VTDPCLVVRV
201: DGKTLLQVKR LKWKFRGNDT IVVNKMTVEV LWDVHSWLFG LPTTGNAVFM FRTCQSTEKS LSFSQDVTTT NSKSHSFGFS LILYAWKSE
101: FWDLSSAKFG SGPEALGGFY VGVVVDKEMV LLLGDMKKEA FKKTNASPSS LGAVFIAKKE HVFGKRVFAT KAQLFADGKF HDLLIECDTN VTDPCLVVRV
201: DGKTLLQVKR LKWKFRGNDT IVVNKMTVEV LWDVHSWLFG LPTTGNAVFM FRTCQSTEKS LSFSQDVTTT NSKSHSFGFS LILYAWKSE
Arabidopsis Description
At5g28150/T24G3_80 [Source:UniProtKB/TrEMBL;Acc:Q8RX84]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.