CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32026	Soybean	cytosol, plastid	92.36	92.67
KRG95548	Soybean	cytosol	83.72	83.72
KRH67230	Soybean	cytosol	82.39	79.23
VIT_07s0151g00930.t01	Wine grape	cytosol, plastid	74.75	75.0
GSMUA_Achr7P07540_001	Banana	endoplasmic reticulum, nucleus, peroxisome, plastid	60.13	69.35
KRH68710	Soybean	plastid	65.78	66.67
GSMUA_Achr5P24690_001	Banana	cytosol	64.12	66.55
EER93250	Sorghum	cytosol, plastid	64.12	66.32
Zm00001d013042_P001	Maize	plastid	64.12	66.32
Os03t0806700-01	Rice	cytosol, endoplasmic reticulum, peroxisome, plastid	64.12	66.32
GSMUA_Achr7P01840_001	Banana	cytosol, peroxisome, plastid	57.48	65.53
KRG92651	Soybean	cytosol	65.12	65.33
HORVU5Hr1G109570.1	Barley	cytosol, plastid	63.12	65.07
Zm00001d034527_P001	Maize	plastid	63.46	64.97
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	64.78	64.78
TraesCS5A01G456500.1	Wheat	plastid	62.79	64.73
KRG96949	Soybean	cytosol, plastid	65.78	64.71
PGSC0003DMT400077341	Potato	cytosol, peroxisome, plasma membrane	62.46	62.05
Solyc09g075960.1.1	Tomato	nucleus, peroxisome, plasma membrane	62.13	61.72
TraesCS5D01G467300.1	Wheat	cytosol, plastid	62.13	60.71
Os07t0572300-01	Rice	plastid	53.82	57.04
TraesCS5B01G465500.1	Wheat	plastid	62.46	55.95
HORVU2Hr1G038060.1	Barley	plastid	51.49	55.36
TraesCS2B01G223900.1	Wheat	plastid	51.49	54.77
TraesCS2D01G204300.1	Wheat	plastid	51.49	54.77
Zm00001d021869_P001	Maize	plastid	50.83	53.87
TraesCS2A01G196200.1	Wheat	plastid	49.83	53.0
OQU90135	Sorghum	plastid	52.49	46.47
KRH26585	Soybean	plastid	39.53	39.53
KRH22720	Soybean	plastid	39.53	39.4
KRH03859	Soybean	cytosol	33.22	37.31
KRH57148	Soybean	cytosol	39.87	36.81
KRH25175	Soybean	cytosol	37.54	35.65
KRH16994	Soybean	cytosol	35.22	34.75
KRH63641	Soybean	cytosol	37.54	34.66
KRH54304	Soybean	cytosol	37.54	34.66
KRH72631	Soybean	cytosol	35.22	34.53
KRH30504	Soybean	plastid	37.21	34.46
KRH67854	Soybean	cytosol	33.55	32.79
KRG96144	Soybean	nucleus	33.22	32.57
KRG90008	Soybean	plastid	33.89	32.38
KRH14191	Soybean	cytosol	31.89	30.87
KRG96948	Soybean	plastid	31.23	30.13
KRG92733	Soybean	plastid	32.89	29.91
KRH68709	Soybean	plastid	29.9	29.51
KRH34068	Soybean	plastid	32.23	29.31
KRH52365	Soybean	plastid	31.56	28.53
KRH61697	Soybean	plastid	28.57	27.65
KRH05263	Soybean	mitochondrion, plastid	29.57	26.18
KRH15788	Soybean	plastid	29.24	25.73

Protein Annotations

EMBL:ACUP02000898	EnsemblPlants:KRH71412	EnsemblPlantsGene:GLYMA_02G146700	EntrezGene:100793503	InterPro:DUF868_pln	PANTHER:PTHR31972
PANTHER:PTHR31972:SF13	PFAM:PF05910	ProteinID:KRH71412	ProteinID:KRH71412.1	SEG:seg	UniParc:UPI0002336D03
UniProt:I1JF98	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:15142175..15143848

Molecular Weight (calculated)

33715.6 Da

IEP (calculated)

8.081

GRAVY (calculated)

-0.094

Length

301 amino acids

Sequence
(BLAST)

001: MREFPSCFGE NGVQIADSSS SSTTRAAQNV VTCVYQCKLR GRSCLITVWW TKTLMGQGLS VGIDDLGNHC LCKVEIKPWL FSKRKGSKNL EVQSGKVDIF
101: WDLSCAKFGS GPEPLEGFYL AVVFNKEMVL LLGDLKKEAC KKIESDCAFS HCGAVCIAKR EHIIGKKFYG AKAQFCDKGQ VHDVTIECDT LGPSDPSLVI
201: RIDSKTVMQV KRLKWKFRGN HTILVDGVPV EVFWDVHSWL FGNAMGNAVF MFQTCISNDK MWEGQSVSDP SALTWASSQQ FRDSQLQGFG FSLIFYVWKH
301: E

Best Arabidopsis Sequence Match ( AT2G04220.1 )
(BLAST)

001: MSFRSHSRGS SQFAEKVTED PVTYKTAQST VTCIYQAHIS GFWRNVTVLW SKNLMNHSLM VMVTNVEGDM NYCCKVDLKP WHFWNKKGYK SFDVEGNPVE
101: VYWDFRSAKF TSSPEPSSDF YVALVSEEEV VLLVGDYKKK AFKRTKSRPA LVEAALFYKK ENVFGKKCFT TRAKFYDRKK EHEIIVESST SGPKEPEMWI
201: SIDGIVLIQV KNLQWKFRGN QTVLVDKQPV QVFWDVYDWL FSMPGTGHGL FIFKPGTTED SDMEGSGHGG GGGGESDTST GSRYYSTKSS NPWPPEFCLF
301: LHAYKLE

Arabidopsis Description

DUF868 family protein (DUF868) [Source:UniProtKB/TrEMBL;Acc:Q9SI11]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.