CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52365	Soybean	plastid	91.32	85.29
KRH05263	Soybean	mitochondrion, plastid	52.73	48.24
KRH15788	Soybean	plastid	52.09	47.37
PGSC0003DMT400068894	Potato	plastid	51.45	45.85
Solyc08g028780.1.1	Tomato	mitochondrion	47.27	43.36
CDY51100	Canola	cytosol	43.09	39.41
Bra028555.1-P	Field mustard	nucleus	43.09	39.07
CDX85733	Canola	cytosol, nucleus, plastid	42.77	38.78
CDX97072	Canola	nucleus	47.27	37.98
AT5G11000.1	Thale cress	cytosol, plastid	47.27	37.79
CDX69793	Canola	nucleus	45.66	37.77
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	46.95	37.63
KRH68710	Soybean	plastid	30.23	31.65
KRG92651	Soybean	cytosol	29.58	30.67
KRH34070	Soybean	cytosol, endoplasmic reticulum, nucleus	29.58	30.56
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	37.3	30.53
KRG96949	Soybean	cytosol, plastid	29.58	30.07
KRG95548	Soybean	cytosol	27.97	28.9
KRH71412	Soybean	cytosol	27.65	28.57
Zm00001d032164_P001	Maize	plastid	36.98	28.47
Zm00001d050436_P001	Maize	plastid	37.3	28.43
KRH32026	Soybean	cytosol, plastid	27.33	28.33
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	36.98	28.26
EES13906	Sorghum	plastid	37.62	27.99
KRH16994	Soybean	cytosol	27.33	27.87
GSMUA_Achr3P04550_001	Banana	plastid	23.79	27.82
Zm00001d020470_P001	Maize	plastid	37.62	27.79
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	34.73	27.76
KRG96948	Soybean	plastid	27.65	27.56
KRH72631	Soybean	cytosol	27.01	27.36
TraesCS5A01G226100.1	Wheat	plastid	36.33	27.29
KRH68709	Soybean	plastid	26.69	27.21
TraesCS5D01G233300.1	Wheat	plastid	36.01	27.05
TraesCS5B01G224600.1	Wheat	plastid	36.01	27.05
KRH67230	Soybean	cytosol	27.01	26.84
Zm00001d005752_P001	Maize	plastid	36.01	26.6
KRG92733	Soybean	plastid	27.97	26.28
Os08t0439600-00	Rice	plastid	34.08	26.11
Zm00001d045119_P001	Maize	plastid	29.26	25.93
KRH26585	Soybean	plastid	25.08	25.91
KRH22720	Soybean	plastid	25.08	25.83
KXG35635	Sorghum	plastid	36.98	25.78
TraesCS7A01G146000.1	Wheat	plastid	27.97	25.51
Os09t0416600-02	Rice	plastid	36.33	25.45
KRH34068	Soybean	plastid	27.01	25.38
KRH63641	Soybean	cytosol	26.37	25.15
KRH54304	Soybean	cytosol	26.37	25.15
HORVU5Hr1G065520.1	Barley	plastid	36.01	24.78
EER87970	Sorghum	plastid	28.3	24.51
KRG90008	Soybean	plastid	24.76	24.44
KRH25175	Soybean	cytosol	24.44	23.97
KRH57148	Soybean	cytosol	25.08	23.93
Os06t0181800-00	Rice	plastid	26.69	23.65
KRH14191	Soybean	cytosol	23.47	23.47
KRH30504	Soybean	plastid	23.79	22.77
KRH67854	Soybean	cytosol	22.51	22.73
TraesCS7D01G147500.1	Wheat	plastid	28.3	22.39
TraesCS7B01G048400.1	Wheat	plastid	27.97	22.14
KRG96144	Soybean	nucleus	21.54	21.82
KRH03859	Soybean	cytosol	18.33	21.27
HORVU7Hr1G029920.1	Barley	mitochondrion	26.69	20.85
Zm00001d037575_P001	Maize	cytosol	12.86	16.6
Os02t0695050-00	Rice	extracellular, golgi, mitochondrion	12.22	14.62

Protein Annotations

EMBL:ACUP02002181	EnsemblPlants:KRH61697	EnsemblPlantsGene:GLYMA_04G062800	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF3
PFAM:PF05910	ProteinID:KRH61697	ProteinID:KRH61697.1	SEG:seg	UniParc:UPI00029646E8	UniProt:K7KIG1
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:5197546..5198563

Molecular Weight (calculated)

34665.8 Da

IEP (calculated)

10.022

GRAVY (calculated)

-0.414

Length

311 amino acids

Sequence
(BLAST)

001: MSSSPFPSCF RPSPNAESHP PPPPPPHSTI SNLTIYHTDT GPVSLTWSRS IVGRSLHIQL HQNPLDSPPY PNPNPNPSPS TTLSFHLHIR PFLFWKKHGS
101: KKLAPNTHLF WNLSRAKFGA TPEPLSGFYV ALVVHNHMTL LIGDAARDAF SKSKARHPNT PQLLLLKKER VFADRLYTTR ARFGGKAPLK WKFRGNERVQ
201: VDGVHVQISW DLYNWLFDKN NNSSSGADAH AIFMFKFEED EVEAVGGDRN NLVALWNLGA SEWGKTWSSS SLSSSGGSFG GSSSVLEWSS VEENELVVPV
301: GFSLLVYAWK R

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.