CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020470_P001	Maize	plastid	82.51	87.41
Zm00001d005752_P001	Maize	plastid	79.6	84.32
TraesCS5A01G226100.1	Wheat	plastid	69.06	74.4
TraesCS5D01G233300.1	Wheat	plastid	68.61	73.91
TraesCS5B01G224600.1	Wheat	plastid	68.61	73.91
Os09t0416600-02	Rice	plastid	71.97	72.3
HORVU5Hr1G065520.1	Barley	plastid	69.06	68.14
EES13906	Sorghum	plastid	60.76	64.83
GSMUA_Achr9P13220_001	Banana	mitochondrion, peroxisome, plastid	45.74	53.68
GSMUA_Achr3P04550_001	Banana	plastid	31.39	52.63
GSMUA_Achr5P22830_001	Banana	cytosol, nucleus, peroxisome	44.17	50.64
GSMUA_Achr10P...	Banana	cytosol, golgi, plastid	43.95	48.16
EER87970	Sorghum	plastid	34.53	42.9
PGSC0003DMT400068894	Potato	plastid	31.61	40.4
Solyc08g028780.1.1	Tomato	mitochondrion	29.82	39.23
KRH52365	Soybean	plastid	28.92	38.74
VIT_04s0008g05970.t01	Wine grape	plastid	31.61	38.01
CDY51100	Canola	cytosol	28.25	37.06
KRH61697	Soybean	plastid	25.78	36.98
CDX69793	Canola	nucleus	30.94	36.7
KRH15788	Soybean	plastid	27.8	36.26
CDX85733	Canola	cytosol, nucleus, plastid	27.8	36.15
Bra008998.1-P	Field mustard	nucleus, peroxisome, plastid	31.39	36.08
CDX97072	Canola	nucleus	31.17	35.92
Bra028555.1-P	Field mustard	nucleus	27.35	35.57
KRH05263	Soybean	mitochondrion, plastid	26.68	35.0
AT5G11000.1	Thale cress	cytosol, plastid	30.27	34.7
CDY56275	Canola	cytosol	11.44	33.33
CDX76763	Canola	plastid	24.22	30.95
AT2G25200.1	Thale cress	plastid	24.44	30.79
Bra007811.1-P	Field mustard	plastid	23.77	30.29
EER93250	Sorghum	cytosol, plastid	19.28	29.55
EES04078	Sorghum	plastid	20.63	28.4
OQU84582	Sorghum	cytosol	20.4	28.35
KXG22966	Sorghum	plastid	20.18	27.52
OQU82880	Sorghum	plastid	19.73	26.75
KXG26216	Sorghum	cytosol	19.96	23.86
KXG21057	Sorghum	mitochondrion	20.18	23.5
OQU90135	Sorghum	plastid	17.26	22.65

Protein Annotations

EnsemblPlants:KXG35635	EnsemblPlantsGene:SORBI_3002G202100	InterPro:DUF868_pln	PANTHER:PTHR31972	PANTHER:PTHR31972:SF14	PFAM:PF05910
ProteinID:KXG35635	ProteinID:KXG35635.1	SEG:seg	UniParc:UPI00081AD58D	UniProt:A0A1B6QCI7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr2:+:59196362..59197702

Molecular Weight (calculated)

47128.8 Da

IEP (calculated)

8.601

GRAVY (calculated)

-0.448

Length

446 amino acids

Sequence
(BLAST)

001: MPDAIPACFR AAAAPGGRAS ASSGSGSGAG TSLATSVYDT RLGLAALSWS RAALGLSLRA VLRVSSAAPS PSAASDYGDG DGDGEVVEYE GECDGDGDEE
101: TVVAVRVRPW LLWRRRGSKR FRVRGGRRVV DVAWDLSRAR FPPSGGSPEP SSGYFVAVVV DGEMAVVAGD MAEEAYRKTK ARRPPGPPPA LVSRREHVSM
201: RDGGRGHRTC VVVRGKEREI SVDLVSRAAA QGQQGREKDR ERDRAEVGMS VSVDGDRVLH VRRLRWKFRG TEKVDLGGGD RVLVSWDLHN WLFPARDASP
301: PDAAVAAAAL TAAVAPPAHA VFVFRFELAG CDDGEERDPA DDAKEKELLD KAGGVGVGGG GGWAGYVGRW GRGGDWSESS SNGEKRRRKR GQASRLAKAS
401: SSSSASVASS SASWASGSTV MDWGSPEEAE LQSGDGFSLL VYAWKN

Best Arabidopsis Sequence Match ( AT5G11000.1 )
(BLAST)

001: MSPSWLRPTA DHNHPPPQPP SQSPSPLSSG DPNLTTCLYQ TDHGVFYLTW SRTFLGGHSV NLFLHSQDYY NHSSPLSFSS ADLSLSSAVS FHLNLNTLAF
101: WKKRGSRFVS PKIQVFWDLS KAKFDSGSEP RSGFYIAVVV DGEMGLLVGD SVKEAYARAK SAKPPTNPQA LLLRKEHVFG ARVFTTKARF GGKNREISID
201: CRVDEDAKLC FSVDSKQVLQ IKRLRWKFRG NEKVEIDGVH VQISWDVYNW LFQSKSSGDG GGGGGHAVFM FRFESDPEAE EVCETKRKEE EDEKNRNGIV
301: LWKPKKQCGN SFGIKGIVEW RKMRKRFVKS KRSSSSSSIS MSSASSACSS SVMEWASSAD EAEYGGGGCS GSGSGNGLGF SLLVYAWIK

Arabidopsis Description

AT5g11000/T30N20_270 [Source:UniProtKB/TrEMBL;Acc:Q9LEU1]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.